fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os007705 not found in 316aa AT4G22810.1 1st_not 0.426339285 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42940.1     ----------------------------------------MAGGTALTPTSVGSKSVPMR
Os007705_Os02t0 MDPVTASIHGHHLPPPFNTRDFHHHLQQQQHQLHLKTEDDQGGG---TPGVFGSRGTK-R
                                                         .**   **  .**:..  *

AT2G42940.1     NHEATER-------GNTNNNLRALPKAVQPVSSIEGEMA-KRPRGRPAGSKNKPKPPIIV
Os007705_Os02t0 DHDDDENSGNGHGSGGDGGDLALVPPSGGGPDGAGSESATRRPRGRPAGSKNKPKPPIII
                :*:  *.       *. ..:*  :* :    ..  .* * :******************:

AT2G42940.1     THDSPNSLRANAVEISSGCDICETLSDFARRKQRGLCILSANGCVTNVTLRQPASSGAIV
Os007705_Os02t0 TRDSANTLRTHVMEVAGGCDISESITTFARRRQRGVCVLSGAGTVTNVTLRQPASQGAVV
                *:**.*:**::.:*::.****.*::: ****:***:*:**. * ***********.**:*

AT2G42940.1     TLHGRYEILSLLGSILPPPAPLGITGLTIYLAGPQGQVVGGGVVGGLIASGPVVLMAASF
Os007705_Os02t0 ALHGRFEILSLSGSFLPPPAPPEATGLTVYLAGGQGQVVGGSVVGALTAAGPVVIMAASF
                :****:***** **:******   ****:**** *******.***.* *:****:*****

AT2G42940.1     MNAVFDRLPMDDDEAASMQ-----------NQQYYQ--NGRSRPLDDIHGLPQNLLTNGN
Os007705_Os02t0 ANAVYERLPLEDDELLAAQGQADSAGLLAAGQQAAQLAGGAVDP-SLFQGLPPNLLGNVQ
                 ***::***::***  : *           .**  *  .*   * . ::*** *** * :

AT2G42940.1     SASD-IYSWGPAQRVMSKP---
Os007705_Os02t0 LPPEAAYGWNPGAG-GGRPAPF
                 ..:  *.*.*.    .:*
BoxShade v3.31 C (beta, 970507) Output
AT2G42940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A G G T A L T P T S V G S K S V P M R
Os007705_Os02t0    M D P V T A S I H G H H L P P P F N T R D F H H H L Q Q Q Q H Q L H L K T E D D Q G G G - - - T P G V F G S R G T K - R
 
AT2G42940.1     N H E A T E R - - - - - - - G N T N N N L R A L P K A V Q P V S S I E G E M A - K R P R G R P A G S K N K P K P P I I V
Os007705_Os02t0    D H D D D E N S G N G H G S G G D G G D L A L V P P S G G G P D G A G S E S A T R R P R G R P A G S K N K P K P P I I I
 
AT2G42940.1     T H D S P N S L R A N A V E I S S G C D I C E T L S D F A R R K Q R G L C I L S A N G C V T N V T L R Q P A S S G A I V
Os007705_Os02t0    T R D S A N T L R T H V M E V A G G C D I S E S I T T F A R R R Q R G V C V L S G A G T V T N V T L R Q P A S Q G A V V
 
AT2G42940.1     T L H G R Y E I L S L L G S I L P P P A P L G I T G L T I Y L A G P Q G Q V V G G G V V G G L I A S G P V V L M A A S F
Os007705_Os02t0    A L H G R F E I L S L S G S F L P P P A P P E A T G L T V Y L A G G Q G Q V V G G S V V G A L T A A G P V V I M A A S F
 
AT2G42940.1     M N A V F D R L P M D D D E A A S M Q - - - - - - - - - - - N Q Q Y Y Q - - N G R S R P L D D I H G L P Q N L L T N G N
Os007705_Os02t0    A N A V Y E R L P L E D D E L L A A Q G Q A D S A G L L A A G Q Q A A Q L A G G A V D P - S L F Q G L P P N L L G N V Q
 
AT2G42940.1     S A S D - I Y S W G P A Q R V M S K P - - -
Os007705_Os02t0    L P P E A A Y G W N P G A G - G G R P A P F
 
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