fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm038768 not found in 253aa AT2G42940.1 1st_1st 0.564732142 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G42940.1     MAGGTALTPTSVGSKSVPMRNHEATERGNTNNN-------LRALPKAVQPVSS--IEGEM
gm038768_Glyma1 MFG--------------EMDRKQEQDKGNSNMSGIDVALISPKVPKAVSPVSSAAAEGDT
                * *               * .::  ::**:* .          :****.****   **: 

AT2G42940.1     AKRPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQRGLCIL
gm038768_Glyma1 LRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLYIL
                 :********************:**.*:*:*:*:*:*****: *:* :********* **

AT2G42940.1     SANGCVTNVTLRQPASSGAIVTLHGRYEILSLLGSILPPPAPLGITGLTIYLAGPQGQVV
gm038768_Glyma1 NGTGCVTNVTLRQPGSAGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVV
                ...***********.*:*********:*************** ***********.*****

AT2G42940.1     GGGVVGGLIASGPVVLMAASFMNAVFDRLPMDDDE-AASMQNQQYYQNGRSRPLD--DIH
gm038768_Glyma1 GGAVVGALIASGPLVIMAASFMHATFDRLPLEDDELAAAMQN-QHYQNGRTHHLDISDLY
                **.***.******:*:******:*.*****::*** **:*** *:*****:: **  *::

AT2G42940.1     GLPQNLLTNGNSASDIYSWGPAQRVMSKP
gm038768_Glyma1 AIPQNLLMNGTMPPEIYSWAPG-RNFSKT
                .:***** **. ..:****.*. * :**.
BoxShade v3.31 C (beta, 970507) Output
AT2G42940.1     M A G G T A L T P T S V G S K S V P M R N H E A T E R G N T N N N - - - - - - - L R A L P K A V Q P V S S - - I E G E M
gm038768_Glyma1    M F G - - - - - - - - - - - - - - E M D R K Q E Q D K G N S N M S G I D V A L I S P K V P K A V S P V S S A A A E G D T
 
AT2G42940.1     A K R P R G R P A G S K N K P K P P I I V T H D S P N S L R A N A V E I S S G C D I C E T L S D F A R R K Q R G L C I L
gm038768_Glyma1    L R R P R G R P A G S K N K P K P P I I V T R D S A N A L K A H A M E V S S G C D V N E S L L N F A R R K Q R G L Y I L
 
AT2G42940.1     S A N G C V T N V T L R Q P A S S G A I V T L H G R Y E I L S L L G S I L P P P A P L G I T G L T I Y L A G P Q G Q V V
gm038768_Glyma1    N G T G C V T N V T L R Q P G S A G A I V T L H G R F E I L S L L G S I L P P P A P P G I T G L T I Y L A G A Q G Q V V
 
AT2G42940.1     G G G V V G G L I A S G P V V L M A A S F M N A V F D R L P M D D D E - A A S M Q N Q Q Y Y Q N G R S R P L D - - D I H
gm038768_Glyma1    G G A V V G A L I A S G P L V I M A A S F M H A T F D R L P L E D D E L A A A M Q N - Q H Y Q N G R T H H L D I S D L Y
 
AT2G42940.1     G L P Q N L L T N G N S A S D I Y S W G P A Q R V M S K P
gm038768_Glyma1    A I P Q N L L M N G T M P P E I Y S W A P G - R N F S K T
 
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