fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G43000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002772 not found in 308aa AT3G12910.1 not_not 0.453151618 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G43000.1     -------MSGEGNLG----KDHEEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLEL
pt002772_POPTR_ MVEKIINMNSQDHLRSTNYKDDDDEEEVQLPGFRFHPTDEELVGFYLRRMVDKKPLRIEL
                       *..:.:*     **.::*:*. *************:*:**** *::*.:::**

AT2G43000.1     IKQIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVY
pt002772_POPTR_ IKQVEIYKYDPWDLPKSSCVGDKEGYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVF
                ***::**********: *.**:** **** ********:********************:

AT2G43000.1     S----NLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKTDSPA--------QQAE
pt002772_POPTR_ SLGGEGRDSIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPTKDNSTSTATVKAKISDQEAE
                *    . *.:****:**** *******************:. :: *.*        *:**

AT2G43000.1     VWTLCRIFKRVTSQRNPTILP--------PNRKPVITLTDTCSKTSSLDSDHTSHRTVD-
pt002772_POPTR_ VWTLCRIFKRNVSCRKYT--PDLKQLSTTPQQPPIDTSSKLCCQ---VESNYTQESYVNF
                ********** .* *: *  *        *:: *: * :. *.:   ::*::*..  *: 

AT2G43000.1     ------SMSHEPPLP--QPQNPYWNQHIVGFNQPTYTGNDNNLLMSFWNGNGGDFIGDSA
pt002772_POPTR_ GAPLIQHYDNKPPVHHVKERKPLHVDQLSYVAQPPSMASSLNISSPY-----GNQILTHG
                        .::**:   : ::*   :::  . **.  ... *:  .:     *: *   .

AT2G43000.1     SWDELRSVIDGNTKP---
pt002772_POPTR_ DWDELTSVVDCAFDPFLV
                .**** **:*   .*
BoxShade v3.31 C (beta, 970507) Output
AT2G43000.1     - - - - - - - M S G E G N L G - - - - K D H E E E N E A P L P G F R F H P T D E E L L G Y Y L R R K V E N K T I K L E L
pt002772_POPTR_    M V E K I I N M N S Q D H L R S T N Y K D D D D E E E V Q L P G F R F H P T D E E L V G F Y L R R M V D K K P L R I E L
 
AT2G43000.1     I K Q I D I Y K Y D P W D L P R V S S V G E K E W Y F F C M R G R K Y R N S V R P N R V T G S G F W K A T G I D K P V Y
pt002772_POPTR_    I K Q V E I Y K Y D P W D L P K S S C V G D K E G Y F F C K R G R K Y R N S I R P N R V T G S G F W K A T G I D K P V F
 
AT2G43000.1     S - - - - N L D C V G L K K S L V Y Y L G S A G K G T K T D W M M H E F R L P S T T K T D S P A - - - - - - - - Q Q A E
pt002772_POPTR_    S L G G E G R D S I G L K K T L V Y Y R G S A G K G T K T D W M M H E F R L P T K D N S T S T A T V K A K I S D Q E A E
 
AT2G43000.1     V W T L C R I F K R V T S Q R N P T I L P - - - - - - - - P N R K P V I T L T D T C S K T S S L D S D H T S H R T V D -
pt002772_POPTR_    V W T L C R I F K R N V S C R K Y T - - P D L K Q L S T T P Q Q P P I D T S S K L C C Q - - - V E S N Y T Q E S Y V N F
 
AT2G43000.1     - - - - - - S M S H E P P L P - - Q P Q N P Y W N Q H I V G F N Q P T Y T G N D N N L L M S F W N G N G G D F I G D S A
pt002772_POPTR_    G A P L I Q H Y D N K P P V H H V K E R K P L H V D Q L S Y V A Q P P S M A S S L N I S S P Y - - - - - G N Q I L T H G
 
AT2G43000.1     S W D E L R S V I D G N T K P - - -
pt002772_POPTR_    D W D E L T S V V D C A F D P F L V
 
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