fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G43000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004634 not found in 343aa AT2G43000.1 1st_1st 0.429301533 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G43000.1     ------MSGEGNLGK-----DHEEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLEL
Sb004634_Sorbi1 MAKEIVMAGEHGEGEEVVLVEDEEEEEDMLPGFRFHPTDEELVTFYLRRKVAGKRLSIEI
                      *:** . *:     :.***:*  *************: :****** .* :.:*:

AT2G43000.1     IKQIDIYKYDPWDLPRVSSV-GEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPV
Sb004634_Sorbi1 IKDFDIYKHDPWDLPKSSSILGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPI
                **::****:******: **: *********:********:*****************:*:

AT2G43000.1     YSNL-----DCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLP---STTKTDSPAQQAEVWT
Sb004634_Sorbi1 HSAASGRAGDPIGLKKSLVFYRGSAGKGTKTEWMMHEFRLPPRAESAHTSPSEQEAEVWT
                :*       * :*******:* *********:*********   .:::*... *:*****

AT2G43000.1     LCRIFKR-VTSQRNP---------TILPPNRKPVITLT--DTCSKTSSLDSDHTSHRTVD
Sb004634_Sorbi1 ICRIFRRNFTYKKHPQQQQIAGSSKVSAAATAAVVTTQPGESSSVTGSLESDTGDEYTND
                :****:* .* :::*         .: ..   .*:*    ::.* *.**:**  .. * *

AT2G43000.1     SMSHEPPLPQP--------------------QNPYWNQHIVG------FNQPTYTGNDNN
Sb004634_Sorbi1 -------LPQPTQAPAIVDGYDYDYGYGYDQQQGQWNSHALHAAATAPLPSPTMAAFHHS
                       ****                    *:  **.* :       : .** :. .:.

AT2G43000.1     LLMSFWNGNGGD---FIGDSASWDELRSVIDGNTKP--------------
Sb004634_Sorbi1 VLSSPAAGGGLDDMYYKDGSSSWDDIGRMVMELTDPSPGVFSFYDTRSYV
                :* *   *.* *   : ..*:***::  ::   *.*
BoxShade v3.31 C (beta, 970507) Output
AT2G43000.1     - - - - - - M S G E G N L G K - - - - - D H E E E N E A P L P G F R F H P T D E E L L G Y Y L R R K V E N K T I K L E L
Sb004634_Sorbi1    M A K E I V M A G E H G E G E E V V L V E D E E E E E D M L P G F R F H P T D E E L V T F Y L R R K V A G K R L S I E I
 
AT2G43000.1     I K Q I D I Y K Y D P W D L P R V S S V - G E K E W Y F F C M R G R K Y R N S V R P N R V T G S G F W K A T G I D K P V
Sb004634_Sorbi1    I K D F D I Y K H D P W D L P K S S S I L G E K E W Y F F C L R G R K Y R N S I R P N R V T G S G F W K A T G I D R P I
 
AT2G43000.1     Y S N L - - - - - D C V G L K K S L V Y Y L G S A G K G T K T D W M M H E F R L P - - - S T T K T D S P A Q Q A E V W T
Sb004634_Sorbi1    H S A A S G R A G D P I G L K K S L V F Y R G S A G K G T K T E W M M H E F R L P P R A E S A H T S P S E Q E A E V W T
 
AT2G43000.1     L C R I F K R - V T S Q R N P - - - - - - - - - T I L P P N R K P V I T L T - - D T C S K T S S L D S D H T S H R T V D
Sb004634_Sorbi1    I C R I F R R N F T Y K K H P Q Q Q Q I A G S S K V S A A A T A A V V T T Q P G E S S S V T G S L E S D T G D E Y T N D
 
AT2G43000.1     S M S H E P P L P Q P - - - - - - - - - - - - - - - - - - - - Q N P Y W N Q H I V G - - - - - - F N Q P T Y T G N D N N
Sb004634_Sorbi1    - - - - - - - L P Q P T Q A P A I V D G Y D Y D Y G Y G Y D Q Q Q G Q W N S H A L H A A A T A P L P S P T M A A F H H S
 
AT2G43000.1     L L M S F W N G N G G D - - - F I G D S A S W D E L R S V I D G N T K P - - - - - - - - - - - - - -
Sb004634_Sorbi1    V L S S P A A G G G L D D M Y Y K D G S S S W D D I G R M V M E L T D P S P G V F S F Y D T R S Y V
 
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