fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G43000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000646 not found in 438aa AT1G26870.1 not_not 0.402044293 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G43000.1     MSGEGNLGKDHEEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDP
gm000646_Glyma0 MMEERN--NDAEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLTIELIKQLDIYKFDP
                *  * *  :* *: :*. *************:*:**:**::::.:.:*****:****:**

AT2G43000.1     WDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSN--LDCVGLK
gm000646_Glyma0 WDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLK
                ****::::.*******:* *.******.*******:******* *:*:**.   .*:***

AT2G43000.1     KSLVYYLGSAGKGTKTDWMMHEFRLPSTTKTDSPA------QQAEVWTLCRIFKRV--TS
gm000646_Glyma0 KSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSLSPKYIDKTIPANESWAICRIFKKINATA
                ****:* * *.**.************* *.: **          * *::*****::  *:

AT2G43000.1     QRN-----PTILPPNRK-------------------------------------------
gm000646_Glyma0 QRTLSQSWASSLPPDTRTSDHHIQTKDQDSTTQFCSDNMPMTNKTTLTSQFCNNNYNDSQ
                **.     .: ***: :                                           

AT2G43000.1     ---------------------------------------------------------PVI
gm000646_Glyma0 PLPTNSSSSPLCPLDVASYKSIINPLLYKAFDHFPISNEDLRTSLLFSPPFETSDANPKS
                                                                         *  

AT2G43000.1     TLTDTCSKTSSL------DSDHTSHRTVDSMSH------------EPPLPQPQNPYWNQH
gm000646_Glyma0 TMVDVSSMLLSLPSSVLGDFNKTTSEDTNTASNFGVLQEHCSGYPIPFLPEMQTTFGNQ-
                *:.*..*   **      * ::*: . .:: *:             * **: *..: ** 

AT2G43000.1     IVGFNQPTYTGNDNNL-------------------------------------LMSFWNG
gm000646_Glyma0 -----QQQYCDNINALVKGPNVNVPRVDDQELELETVVQRSIGFPLSATMPLNIVDAWKS
                     *  * .* * *                                     ::. *:.

AT2G43000.1     NGGDFIGDSASWD-ELRSVIDGNTKP--
gm000646_Glyma0 N--NLLWDTSSFPCDMPSSYYSTTKCYT
                *  ::: *::*:  :: *   ..**
BoxShade v3.31 C (beta, 970507) Output
AT2G43000.1     M S G E G N L G K D H E E E N E A P L P G F R F H P T D E E L L G Y Y L R R K V E N K T I K L E L I K Q I D I Y K Y D P
gm000646_Glyma0    M M E E R N - - N D A E K L D E V M L P G F R F H P T D E E L V G F Y L K R K I Q Q R P L T I E L I K Q L D I Y K F D P
 
AT2G43000.1     W D L P R V S S V G E K E W Y F F C M R G R K Y R N S V R P N R V T G S G F W K A T G I D K P V Y S N - - L D C V G L K
gm000646_Glyma0    W D L P K L A T T G E K E W Y F Y C P R D R K Y R N S A R P N R V T G A G F W K A T G T D R P I Y S S E G S K C I G L K
 
AT2G43000.1     K S L V Y Y L G S A G K G T K T D W M M H E F R L P S T T K T D S P A - - - - - - Q Q A E V W T L C R I F K R V - - T S
gm000646_Glyma0    K S L V F Y K G R A A K G V K T D W M M H E F R L P S L T D S L S P K Y I D K T I P A N E S W A I C R I F K K I N A T A
 
AT2G43000.1     Q R N - - - - - P T I L P P N R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm000646_Glyma0    Q R T L S Q S W A S S L P P D T R T S D H H I Q T K D Q D S T T Q F C S D N M P M T N K T T L T S Q F C N N N Y N D S Q
 
AT2G43000.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P V I
gm000646_Glyma0    P L P T N S S S S P L C P L D V A S Y K S I I N P L L Y K A F D H F P I S N E D L R T S L L F S P P F E T S D A N P K S
 
AT2G43000.1     T L T D T C S K T S S L - - - - - - D S D H T S H R T V D S M S H - - - - - - - - - - - - E P P L P Q P Q N P Y W N Q H
gm000646_Glyma0    T M V D V S S M L L S L P S S V L G D F N K T T S E D T N T A S N F G V L Q E H C S G Y P I P F L P E M Q T T F G N Q -
 
AT2G43000.1     I V G F N Q P T Y T G N D N N L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L M S F W N G
gm000646_Glyma0    - - - - - Q Q Q Y C D N I N A L V K G P N V N V P R V D D Q E L E L E T V V Q R S I G F P L S A T M P L N I V D A W K S
 
AT2G43000.1     N G G D F I G D S A S W D - E L R S V I D G N T K P - -
gm000646_Glyma0    N - - N L L W D T S S F P C D M P S S Y Y S T T K C Y T
 
0