fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G43000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043186 not found in 337aa AT2G43000.1 1st_1st 0.442930153 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G43000.1     MSGEGNLGKD-----HE--EENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQI
gm043186_Glyma1 MGVNEDFNQDIDYDHHEYVDDDDVPLPGFRFHPTDEELVSFYLQRKLDKKPISIELIKQI
                *. : ::.:*     **  ::::.**************:.:**:**:::*.*.:******

AT2G43000.1     DIYKYDPWDLPRVSSV-GEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSN-
gm043186_Glyma1 DIYKYDPWDLPKTSATGGEKEGYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHG
                ***********:.*:. **** **** ********:**********************: 

AT2G43000.1     ---LDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKT------------DSPAQQA
gm043186_Glyma1 GEGNDCIGLKKTLVYYRGSAGKGIKTDWMMHEFRLPSNTDNNNTNLRSSKNYVDVP-QEA
                    **:****:**** ****** *************.*..            * * *:*

AT2G43000.1     EVWTLCRIFKRVTSQRNPTILPPNRKPVI----TLTDTCSKTSSLDSDHTSHRT-VDSMS
gm043186_Glyma1 EIWTLCRIFKRNVSQRKHT---PDLKQISAKRQSIHDKSSRMSNVEFNTTNQESYINFGG
                *:********* .***: *   *: * :     :: *..*: *.:: : *.:.: ::  .

AT2G43000.1     HEPPLPQPQNPYWNQ------HIVGFNQ------------PTYTGNDNNLLMSFWNGN--
gm043186_Glyma1 HYHNEQKPTINYTNSDQRNQYHVMTHHQLCAPVAQQHQQPQQLTSPSSN----FWINNPP
                *     :*   * *.      *:: .:*               *. ..*    ** .*  

AT2G43000.1     GGDFIGDSASWDELRSVID-GNTKP---------------------
gm043186_Glyma1 GNDFF-TFDNWDELGSLVKFAVDSPSFLFYKKQVLDTLKLVSYKKN
                *.**:    .**** *::. .  .*
BoxShade v3.31 C (beta, 970507) Output
AT2G43000.1     M S G E G N L G K D - - - - - H E - - E E N E A P L P G F R F H P T D E E L L G Y Y L R R K V E N K T I K L E L I K Q I
gm043186_Glyma1    M G V N E D F N Q D I D Y D H H E Y V D D D D V P L P G F R F H P T D E E L V S F Y L Q R K L D K K P I S I E L I K Q I
 
AT2G43000.1     D I Y K Y D P W D L P R V S S V - G E K E W Y F F C M R G R K Y R N S V R P N R V T G S G F W K A T G I D K P V Y S N -
gm043186_Glyma1    D I Y K Y D P W D L P K T S A T G G E K E G Y F F C R R G R K Y R N S I R P N R V T G S G F W K A T G I D K P V Y S H G
 
AT2G43000.1     - - - L D C V G L K K S L V Y Y L G S A G K G T K T D W M M H E F R L P S T T K T - - - - - - - - - - - - D S P A Q Q A
gm043186_Glyma1    G E G N D C I G L K K T L V Y Y R G S A G K G I K T D W M M H E F R L P S N T D N N N T N L R S S K N Y V D V P - Q E A
 
AT2G43000.1     E V W T L C R I F K R V T S Q R N P T I L P P N R K P V I - - - - T L T D T C S K T S S L D S D H T S H R T - V D S M S
gm043186_Glyma1    E I W T L C R I F K R N V S Q R K H T - - - P D L K Q I S A K R Q S I H D K S S R M S N V E F N T T N Q E S Y I N F G G
 
AT2G43000.1     H E P P L P Q P Q N P Y W N Q - - - - - - H I V G F N Q - - - - - - - - - - - - P T Y T G N D N N L L M S F W N G N - -
gm043186_Glyma1    H Y H N E Q K P T I N Y T N S D Q R N Q Y H V M T H H Q L C A P V A Q Q H Q Q P Q Q L T S P S S N - - - - F W I N N P P
 
AT2G43000.1     G G D F I G D S A S W D E L R S V I D - G N T K P - - - - - - - - - - - - - - - - - - - - -
gm043186_Glyma1    G N D F F - T F D N W D E L G S L V K F A V D S P S F L F Y K K Q V L D T L K L V S Y K K N
 
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