fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G43280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040151 not found in 195aa AT4G12850.1 not_not 0.433333333 III
Pt018075 not found in 224aa AT4G12850.1 not_not 0.416666666 III
Pt018076 not found in 215aa AT4G12850.1 not_not 0.409523809 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G43280.1     MEDEDDPT-----------------------TKNSNNTDDFAIEPREGIIFESEDAAKMF
pt018076_POPTR_ MIDPGDPGKTCDPNLKPVDLDKGVVDTSTCCVEEEETVGDGIAEPDVGMEFESEDAARRF
pt018075_POPTR_ MIDPGDPGKTCDPNLKPVDLDKGVVDTSTCCVEEEETVGDGIAEPDVGMEFESEDAARRF
pt040151_POPTR_ -------------------MD----------VEEEEEA--GIVEPCVGMEFESEDAARKF
                                               .::.: .     **  *: *******: *

AT2G43280.1     YDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIRGKF--GSVRKPRPSTRE
pt018076_POPTR_ YTEYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNHRTDV--GPDKKPRPGARD
pt018075_POPTR_ YTEYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNHRTDV--GPDKKPRPGARD
pt040151_POPTR_ YSEYARRLGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNNRTIVGPGPDKKPRPSARE
                * :*:**:**.:***. ***  *** ****:****:*.. . *  .  *. :****.:*:

AT2G43280.1     GCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLDEKDKRIQELTIELRNKKRL
pt018076_POPTR_ GCKATILVKMEKSGKWVVTRFEKDHNHPLV----------GGKDKKIEELTQELEHQEQL
pt018075_POPTR_ GCKATILVKMEKSGKWVVTRFEKDHNHPLVVTT-SGFSSSGGKDKKIEELTQELEHQEQL
pt040151_POPTR_ GCKATILVKMDKSGKWVVTRFEKDHNHPLVVTA-SGFSSSGDKDKKIEELTKELEHQDHL
                **** * ** ::*****:*:* *:******          . ***:*:*** **.::.:*

AT2G43280.1     CAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFEHLEHALLRSKQDAI
pt018076_POPTR_ CATYREKLLSFMNNVVEEAEELASKIQVIVDSVRKVESEVQKFSRHG----
pt018075_POPTR_ CATYREKLLSFMNNVVEEAEELASKIQVIVDSVRKVESEVQKFSRHG----
pt040151_POPTR_ CATYREKLVSFMNSIEEQTEELASKIQLIVDNVRKVESEVQNFSRRR----
                **:*:*:* :* : : *.::::*.*:: :*:.:::.*   : : *
BoxShade v3.31 C (beta, 970507) Output
AT2G43280.1     M E D E D D P T - - - - - - - - - - - - - - - - - - - - - - - T K N S N N T D D F A I E P R E G I I F E S E D A A K M F
pt018076_POPTR_    M I D P G D P G K T C D P N L K P V D L D K G V V D T S T C C V E E E E T V G D G I A E P D V G M E F E S E D A A R R F
pt018075_POPTR_    M I D P G D P G K T C D P N L K P V D L D K G V V D T S T C C V E E E E T V G D G I A E P D V G M E F E S E D A A R R F
pt040151_POPTR_    - - - - - - - - - - - - - - - - - - - M D - - - - - - - - - - V E E E E E A - - G I V E P C V G M E F E S E D A A R K F
 
AT2G43280.1     Y D D Y S R R L G F V M R V M S C R R S E K D G R I L A R R F G C N K E G H C V S I R G K F - - G S V R K P R P S T R E
pt018076_POPTR_    Y T E Y A R R V G F A V R V M Q R R R S G I D G R T L A R R L G C N K Q G F S P N H R T D V - - G P D K K P R P G A R D
pt018075_POPTR_    Y T E Y A R R V G F A V R V M Q R R R S G I D G R T L A R R L G C N K Q G F S P N H R T D V - - G P D K K P R P G A R D
pt040151_POPTR_    Y S E Y A R R L G F V V R V M Q R R R S G I D G R T L A R R L G C N K Q G F S P N N R T I V G P G P D K K P R P S A R E
 
AT2G43280.1     G C K A M I H V K Y D R S G K W V I T K F V K E H N H P L V V S P R E A R H T L D E K D K R I Q E L T I E L R N K K R L
pt018076_POPTR_    G C K A T I L V K M E K S G K W V V T R F E K D H N H P L V - - - - - - - - - - G G K D K K I E E L T Q E L E H Q E Q L
pt018075_POPTR_    G C K A T I L V K M E K S G K W V V T R F E K D H N H P L V V T T - S G F S S S G G K D K K I E E L T Q E L E H Q E Q L
pt040151_POPTR_    G C K A T I L V K M D K S G K W V V T R F E K D H N H P L V V T A - S G F S S S G D K D K K I E E L T K E L E H Q D H L
 
AT2G43280.1     C A A Y K E Q L D A F A K I V E E H S N Q I A K K V E N V V N N L K E F E H L E H A L L R S K Q D A I
pt018076_POPTR_    C A T Y R E K L L S F M N N V V E E A E E L A S K I Q V I V D S V R K V E S E V Q K F S R H G - - - -
pt018075_POPTR_    C A T Y R E K L L S F M N N V V E E A E E L A S K I Q V I V D S V R K V E S E V Q K F S R H G - - - -
pt040151_POPTR_    C A T Y R E K L V S F M N S I E E Q T E E L A S K I Q L I V D N V R K V E S E V Q N F S R R R - - - -
 
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