fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G43280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003434 not found in 185aa AT2G43280.1 1st_1st 0.735714285 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G43280.1     MEDEDDPTTKNSNNTDDFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKD
pt003434_POPTR_ -----------------MVVEPHEGMEFESEDAAKIFYDEYARRIGFVMRVMSCRRSERD
                                 :.:**:**: ********:***:*:**:*************:*

AT2G43280.1     GRILARRFGCNKEGHCVSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEH
pt003434_POPTR_ GRILARRLGCNKEGYCVSIRGKFGNVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKDH
                *******:******:*********.*******************:*:***********:*

AT2G43280.1     NHPLVVSPREARHTLDEKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKK
pt003434_POPTR_ NHPLVVAPREARQTLDEKDKKIQELTAELRNKKRLCATYQEQLSAFVKIVEDHSEKLSKK
                ******:*****:*******:***** **********:*:***.**.****:**::::**

AT2G43280.1     VENVVNNLKEFEHLEHALLRSKQDAI
pt003434_POPTR_ VKNAVENLKEFESIEQELMQHT----
                *:*.*:****** :*: *:: .
BoxShade v3.31 C (beta, 970507) Output
AT2G43280.1     M E D E D D P T T K N S N N T D D F A I E P R E G I I F E S E D A A K M F Y D D Y S R R L G F V M R V M S C R R S E K D
pt003434_POPTR_    - - - - - - - - - - - - - - - - - M V V E P H E G M E F E S E D A A K I F Y D E Y A R R I G F V M R V M S C R R S E R D
 
AT2G43280.1     G R I L A R R F G C N K E G H C V S I R G K F G S V R K P R P S T R E G C K A M I H V K Y D R S G K W V I T K F V K E H
pt003434_POPTR_    G R I L A R R L G C N K E G Y C V S I R G K F G N V R K P R P S T R E G C K A M I H V K F D K S G K W V I T K F V K D H
 
AT2G43280.1     N H P L V V S P R E A R H T L D E K D K R I Q E L T I E L R N K K R L C A A Y K E Q L D A F A K I V E E H S N Q I A K K
pt003434_POPTR_    N H P L V V A P R E A R Q T L D E K D K K I Q E L T A E L R N K K R L C A T Y Q E Q L S A F V K I V E D H S E K L S K K
 
AT2G43280.1     V E N V V N N L K E F E H L E H A L L R S K Q D A I
pt003434_POPTR_    V K N A V E N L K E F E S I E Q E L M Q H T - - - -
 
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