fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G43280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016867 not found in 241aa AT2G43280.1 1st_1st 0.714285714 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G43280.1     MED-----------------------------EDDPTTK----NSNN------TDDFAI-
gm016867_Glyma0 MESQLVDGNDDMGVSGDVGLSTYEVQMHQETYEVDPNEECRVLESSSGGEVGICDDHAIQ
                **.                             * **. :    :*..       **.** 

AT2G43280.1     EPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIR
gm016867_Glyma0 EPYEGMEFESEDAAKIFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIR
                ** **: ********:***:*:****************:********:******:*****

AT2G43280.1     GKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLDEKDK
gm016867_Glyma0 GKFSSVRKPRASTREGCKAMIHIKYNKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDK
                ***.******.***********:**::***********:*************:*:*****

AT2G43280.1     RIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFEHLEHALLR
gm016867_Glyma0 KIQELTAELRHKKRLCATYQEQLTSFMKIVEEHNEKLSAKIHHVVNNLKEFESIEELLHQ
                :***** ***:******:*:*** :* ******.:::: *:.:********* :*. * :

AT2G43280.1     SKQDAI
gm016867_Glyma0 T-----
                :
BoxShade v3.31 C (beta, 970507) Output
AT2G43280.1     M E D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E D D P T T K - - - - N S N N - - - - - - T D D F A I -
gm016867_Glyma0    M E S Q L V D G N D D M G V S G D V G L S T Y E V Q M H Q E T Y E V D P N E E C R V L E S S S G G E V G I C D D H A I Q
 
AT2G43280.1     E P R E G I I F E S E D A A K M F Y D D Y S R R L G F V M R V M S C R R S E K D G R I L A R R F G C N K E G H C V S I R
gm016867_Glyma0    E P Y E G M E F E S E D A A K I F Y D E Y A R R L G F V M R V M S C R R S E R D G R I L A R R L G C N K E G Y C V S I R
 
AT2G43280.1     G K F G S V R K P R P S T R E G C K A M I H V K Y D R S G K W V I T K F V K E H N H P L V V S P R E A R H T L D E K D K
gm016867_Glyma0    G K F S S V R K P R A S T R E G C K A M I H I K Y N K S G K W V I T K F V K D H N H P L V V S P R E A R Q T M D E K D K
 
AT2G43280.1     R I Q E L T I E L R N K K R L C A A Y K E Q L D A F A K I V E E H S N Q I A K K V E N V V N N L K E F E H L E H A L L R
gm016867_Glyma0    K I Q E L T A E L R H K K R L C A T Y Q E Q L T S F M K I V E E H N E K L S A K I H H V V N N L K E F E S I E E L L H Q
 
AT2G43280.1     S K Q D A I
gm016867_Glyma0    T - - - - -
 
0