fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009956 not found in 259aa AT4G17500.1 not_not 0.413533834 III
Pt032748 not found in 283aa AT4G17500.1 not_not 0.401002506 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G44840.1     ------MSSSD----------------------------SVNNGVNSR------------
pt009956_POPTR_ --MNEVTSLCEFSTLSHHRQH---------------------------------------
pt032748_POPTR_ MYGENFLDQSDYAFLESVRMHLLGEPTSPTTASSCFNPASTNSAMSAAAATTPATCTPVP
                       . .:                                                 

AT2G44840.1     MYFRNPSFSNVI--LNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTP------------
pt009956_POPTR_ ---RSPSFSSLISCLTETWGDLPLRVDDSEDMVIYNSLRDAVRFGWSPLDLTSPTATTAT
pt032748_POPTR_ VYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYGVLSDAVTVGWVP-------SLKTD
                   *..***.:   *.:.*.**** ****:** :*. * ***  ** *            

AT2G44840.1     ----------SVPPVTSP---AEE-------NKPPATKASGSHAPRQKGMQYRGVRRRPW
pt009956_POPTR_ ATITRTTSVVKAEPGYEPEPEAEPMKLV---QEAGLNEAAVSKKVVAKGRHYRGVRQRPW
pt032748_POPTR_ QFIEPNLPAVKLEP-------SENLTISPPRTEAPIAEPAV---VPSKGKHYRGVRQRPW
                          .  *       :*         :.   :.:       ** :*****:***

AT2G44840.1     GKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPV
pt009956_POPTR_ GKFAAEIRDPAKNGARVWLGTYETAEEAGLAYDRAAYRMRGSKALLNFPHKIGSNEPDPV
pt032748_POPTR_ GKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPAPV
                ********** **********:**.*:*.:******:::***:* ****  :.* :  **

AT2G44840.1     RIRPRRRSPEPS-VSDQLTSEQKRESHVDDGESSLVVPE--LD-------FTVDQFYFD-
pt009956_POPTR_ RVTTKRREPETGLPAVDSGSAKTRRILVANGDE--------LERERGSKVFQVAHHIMPL
pt032748_POPTR_ RVTSKRSSPERS-SSVESASLKRKKVGGTAGTAT-VVPQAGLEMRNGVGC-QVGTH----
                *: .:* .** .  : :  * : :.     *          *:         *  .    

AT2G44840.1     GSLLMDQSECSYSDNRI
pt009956_POPTR_ GEQLLVSCGVGGGL---
pt032748_POPTR_ GEQLLVI----------
                *. *:
BoxShade v3.31 C (beta, 970507) Output
AT2G44840.1     - - - - - - M S S S D - - - - - - - - - - - - - - - - - - - - - - - - - - - - S V N N G V N S R - - - - - - - - - - - -
pt009956_POPTR_    - - M N E V T S L C E F S T L S H H R Q H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt032748_POPTR_    M Y G E N F L D Q S D Y A F L E S V R M H L L G E P T S P T T A S S C F N P A S T N S A M S A A A A T T P A T C T P V P
 
AT2G44840.1     M Y F R N P S F S N V I - - L N D N W S D L P L S V D D S Q D M A I Y N T L R D A V S S G W T P - - - - - - - - - - - -
pt009956_POPTR_    - - - R S P S F S S L I S C L T E T W G D L P L R V D D S E D M V I Y N S L R D A V R F G W S P L D L T S P T A T T A T
pt032748_POPTR_    V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y G V L S D A V T V G W V P - - - - - - - S L K T D
 
AT2G44840.1     - - - - - - - - - - S V P P V T S P - - - A E E - - - - - - - N K P P A T K A S G S H A P R Q K G M Q Y R G V R R R P W
pt009956_POPTR_    A T I T R T T S V V K A E P G Y E P E P E A E P M K L V - - - Q E A G L N E A A V S K K V V A K G R H Y R G V R Q R P W
pt032748_POPTR_    Q F I E P N L P A V K L E P - - - - - - - S E N L T I S P P R T E A P I A E P A V - - - V P S K G K H Y R G V R Q R P W
 
AT2G44840.1     G K F A A E I R D P K K N G A R V W L G T Y E T P E D A A V A Y D R A A F Q L R G S K A K L N F P H L I G S C K Y E P V
pt009956_POPTR_    G K F A A E I R D P A K N G A R V W L G T Y E T A E E A G L A Y D R A A Y R M R G S K A L L N F P H K I G S N E P D P V
pt032748_POPTR_    G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P A P V
 
AT2G44840.1     R I R P R R R S P E P S - V S D Q L T S E Q K R E S H V D D G E S S L V V P E - - L D - - - - - - - F T V D Q F Y F D -
pt009956_POPTR_    R V T T K R R E P E T G L P A V D S G S A K T R R I L V A N G D E - - - - - - - - L E R E R G S K V F Q V A H H I M P L
pt032748_POPTR_    R V T S K R S S P E R S - S S V E S A S L K R K K V G G T A G T A T - V V P Q A G L E M R N G V G C - Q V G T H - - - -
 
AT2G44840.1     G S L L M D Q S E C S Y S D N R I
pt009956_POPTR_    G E Q L L V S C G V G G G L - - -
pt032748_POPTR_    G E Q L L V I - - - - - - - - - -
 
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