fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016236 not found in 226aa AT2G44840.1 1st_1st 0.476190476 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G44840.1     MSSSDSVNNG----------------VNSRMYFRNPSFSNVILNDNWSDLPLSVDDSQDM
pt016236_POPTR_ MFGEKSLESGFDVLECNINTVASTSNVNAPTFYKSLSFSNIYSTESWGDLPLKQDDSEDM
                * ...*::.*                **:  :::. ****:  .:.*.****. ***:**

AT2G44840.1     AIYNTLRDAVSSGWTPSV--------------PPVTSPAEENKPPATKASGSHAPRQKGM
pt016236_POPTR_ IVYNALRDAVNFGWLPSILSLQSNMTTTTEEFPQTAVPLE----VAPRESGPQPLKEKGL
                 :**:*****. ** **:              * .: * *     *.: **.:. ::**:

AT2G44840.1     QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPH
pt016236_POPTR_ QYKGVRRRPWGKYAAEIRDPKKNGARMWLGTYETPEDAALAYDRAAFKMRGSKAKLNFPH
                **:*********:*************:************:*******::***********

AT2G44840.1     LIGS-CKYEPVRIRPRRR-SPEP----SVSDQLTSEQKRESHVDDGESSLVVPELDFTVD
pt016236_POPTR_ LIGSNNNWEPTRVTSKKRSSPEPSSSISISDYDSPRWTKQSKISSG--------------
                ****  ::**.*: .::* ****    *:**  :.. .::*::..*              

AT2G44840.1     QFYFDGSLLMDQSECSYSDNRI
pt016236_POPTR_ -------------ICFH-----
                              * :
BoxShade v3.31 C (beta, 970507) Output
AT2G44840.1     M S S S D S V N N G - - - - - - - - - - - - - - - - V N S R M Y F R N P S F S N V I L N D N W S D L P L S V D D S Q D M
pt016236_POPTR_    M F G E K S L E S G F D V L E C N I N T V A S T S N V N A P T F Y K S L S F S N I Y S T E S W G D L P L K Q D D S E D M
 
AT2G44840.1     A I Y N T L R D A V S S G W T P S V - - - - - - - - - - - - - - P P V T S P A E E N K P P A T K A S G S H A P R Q K G M
pt016236_POPTR_    I V Y N A L R D A V N F G W L P S I L S L Q S N M T T T T E E F P Q T A V P L E - - - - V A P R E S G P Q P L K E K G L
 
AT2G44840.1     Q Y R G V R R R P W G K F A A E I R D P K K N G A R V W L G T Y E T P E D A A V A Y D R A A F Q L R G S K A K L N F P H
pt016236_POPTR_    Q Y K G V R R R P W G K Y A A E I R D P K K N G A R M W L G T Y E T P E D A A L A Y D R A A F K M R G S K A K L N F P H
 
AT2G44840.1     L I G S - C K Y E P V R I R P R R R - S P E P - - - - S V S D Q L T S E Q K R E S H V D D G E S S L V V P E L D F T V D
pt016236_POPTR_    L I G S N N N W E P T R V T S K K R S S P E P S S S I S I S D Y D S P R W T K Q S K I S S G - - - - - - - - - - - - - -
 
AT2G44840.1     Q F Y F D G S L L M D Q S E C S Y S D N R I
pt016236_POPTR_    - - - - - - - - - - - - - I C F H - - - - -
 
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