fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006738 not found in 195aa AT2G44840.1 1st_1st 0.443609022 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G44840.1     MSSSDSVNNGVNSRMYF----------------------RNPSFSNVILNDNWSDLPLSV
gm006738_Glyma0 -MSSHALNTNVNALDHFEIPVTTPFQDVSASVPSIAAFCRSSSFRNIFLTENWAELPLKE
                  **.::*..**:  :*                      *..** *::*.:**::***. 

AT2G44840.1     DDSQDMAIYNTLRDAVSSGWTP---------SVPPVTSPAEENKPPATKASGSHAPRQKG
gm006738_Glyma0 NDTNDMVIYGALRDAAATGWFPANGNEVSNVSV-AVKMENEGQNSKTTAARGTRTPPKKG
                :*::**.**.:****.::** *         ** .*.   * ::. :* * *:::* :**

AT2G44840.1     MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP
gm006738_Glyma0 LSYRGVRRRPWGKYAAEIRDTKRNGVRVWLGTYETAEDAALAYDRAAFKMRGSKAKLNFP
                :.***********:******.*:**.*********.****:*******::**********

AT2G44840.1     HLIGSCKYEPVRIRPRRRSPEPSVSDQLTSEQKRESHVDDGESSLVVPELDFTVDQFYFD
gm006738_Glyma0 HLIGS-DHEPIKVTLKKH------------------------------------------
                ***** .:**:::  :::                                          

AT2G44840.1     GSLLMDQSECSYSDNRI
gm006738_Glyma0 -----------------
BoxShade v3.31 C (beta, 970507) Output
AT2G44840.1     M S S S D S V N N G V N S R M Y F - - - - - - - - - - - - - - - - - - - - - - R N P S F S N V I L N D N W S D L P L S V
gm006738_Glyma0    - M S S H A L N T N V N A L D H F E I P V T T P F Q D V S A S V P S I A A F C R S S S F R N I F L T E N W A E L P L K E
 
AT2G44840.1     D D S Q D M A I Y N T L R D A V S S G W T P - - - - - - - - - S V P P V T S P A E E N K P P A T K A S G S H A P R Q K G
gm006738_Glyma0    N D T N D M V I Y G A L R D A A A T G W F P A N G N E V S N V S V - A V K M E N E G Q N S K T T A A R G T R T P P K K G
 
AT2G44840.1     M Q Y R G V R R R P W G K F A A E I R D P K K N G A R V W L G T Y E T P E D A A V A Y D R A A F Q L R G S K A K L N F P
gm006738_Glyma0    L S Y R G V R R R P W G K Y A A E I R D T K R N G V R V W L G T Y E T A E D A A L A Y D R A A F K M R G S K A K L N F P
 
AT2G44840.1     H L I G S C K Y E P V R I R P R R R S P E P S V S D Q L T S E Q K R E S H V D D G E S S L V V P E L D F T V D Q F Y F D
gm006738_Glyma0    H L I G S - D H E P I K V T L K K H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G44840.1     G S L L M D Q S E C S Y S D N R I
gm006738_Glyma0    - - - - - - - - - - - - - - - - -
 
0