fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006781 not found in 287aa AT2G44940.1 1st_1st 0.472906403 Ia
Pt016119 not found in 269aa AT2G44940.1 1st_1st 0.504926108 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G44940.1     -----------------MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTS
pt016119_POPTR_ -----------------MEKHIILEIDAQDNSLTSSS-TS-----TTTTTTTTSSSSSSF
gm006781_Glyma0 MHPPTHSFYTTLIKFSTMRKRINMESDADFNSFATST-PSIFFDTNTSSTSSSSSSSSSS
                                 * ::* :* ...  :: :*: .:     . ::::: ***.:: 

AT2G44940.1     SSSSSSTNSNFIEEDNSK--RKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGD--KHPT
pt016119_POPTR_ STTISYTDRISKKEENSIADPKGSRKSQELQSGNEGNK-------KRKTTRNENNGKHPT
gm006781_Glyma0 SSTSPTSNKDSCTKEHTKTPQNDSTISQTSLENKEDSKE-----CKKRQRDNSNQNHHPT
                *:: . ::     ::::    : *  *     . *...       *::   . :  :***

AT2G44940.1     YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLA
pt016119_POPTR_ YRGVRMRSWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPELV
gm006781_Glyma0 YRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELA
                *******.*****.*********************************** :******:*.

AT2G44940.1     GELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTST
pt016119_POPTR_ DELPRPLSKSPKDIQAAAAKAA---AASFPETRHCEAEAEAEADMSHAELN--VSNLSDN
gm006781_Glyma0 QELPRPASTSPKDIQAAASKAA---NTAFEVVKHCQITEEQEQEQNQAE-----QETSST
                 ***** :.*********: **     :.  . :.:     * : .:*      .. :..

AT2G44940.1     TTTTQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLC
pt016119_POPTR_ LAMDNIQE------SSSSPSTDVD---DKLFDLPDLFIDGVNH---SDGFCYYSPPWQLC
gm006781_Glyma0 LSMDNTQE------PSSSHSTNDD---DTLFDLPDLFPDGNN------GLCSFS-SWHLC
                 :  : **      .*:* .*: *   :.******** *  :      .:* :* .*:**

AT2G44940.1     GADAGFRLEEPFFLSE-
pt016119_POPTR_ SADTGFRLEEPFLWEY-
gm006781_Glyma0 AVDSGFRLEESFFWENY
                ..*:******.*: .
BoxShade v3.31 C (beta, 970507) Output
AT2G44940.1     - - - - - - - - - - - - - - - - - M A R Q I N I E S S V S Q V T F I S S A I P A V S S S S S I T A S A S L S S S P T T S
pt016119_POPTR_    - - - - - - - - - - - - - - - - - M E K H I I L E I D A Q D N S L T S S S - T S - - - - - T T T T T T T T S S S S S S F
gm006781_Glyma0    M H P P T H S F Y T T L I K F S T M R K R I N M E S D A D F N S F A T S T - P S I F F D T N T S S T S S S S S S S S S S
 
AT2G44940.1     S S S S S S T N S N F I E E D N S K - - R K A S R R S L S S L V S V E D D D D Q N G G G G K R R K T N G G D - - K H P T
pt016119_POPTR_    S T T I S Y T D R I S K K E E N S I A D P K G S R K S Q E L Q S G N E G N K - - - - - - - K R K T T R N E N N G K H P T
gm006781_Glyma0    S S T S P T S N K D S C T K E H T K T P Q N D S T I S Q T S L E N K E D S K E - - - - - C K K R Q R D N S N Q N H H P T
 
AT2G44940.1     Y R G V R M R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G T T A Y L N F P K L A
pt016119_POPTR_    Y R G V R M R S W G K W V C E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E L V
gm006781_Glyma0    Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G H S A Y L N F P E L A
 
AT2G44940.1     G E L P R P V T N S P K D I Q A A A S L A A V N W Q D S V N D V S N S E V A E I V E A E P S R A V V A Q L F S S D T S T
pt016119_POPTR_    D E L P R P L S K S P K D I Q A A A A K A A - - - A A S F P E T R H C E A E A E A E A D M S H A E L N - - V S N L S D N
gm006781_Glyma0    Q E L P R P A S T S P K D I Q A A A S K A A - - - N T A F E V V K H C Q I T E E Q E Q E Q N Q A E - - - - - Q E T S S T
 
AT2G44940.1     T T T T Q S Q E Y S E A S C A S T S A C T D K D S E E E K L F D L P D L F T D E N E M M I R N D A F C Y Y S S T W Q L C
pt016119_POPTR_    L A M D N I Q E - - - - - - S S S S P S T D V D - - - D K L F D L P D L F I D G V N H - - - S D G F C Y Y S P P W Q L C
gm006781_Glyma0    L S M D N T Q E - - - - - - P S S S H S T N D D - - - D T L F D L P D L F P D G N N - - - - - - G L C S F S - S W H L C
 
AT2G44940.1     G A D A G F R L E E P F F L S E -
pt016119_POPTR_    S A D T G F R L E E P F L W E Y -
gm006781_Glyma0    A V D S G F R L E E S F F W E N Y
 
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