fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040183 not found in 272aa AT2G44940.1 not_1st 0.485221674 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G44940.1     -----------MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSSSS
pt040183_POPTR_ MPLALARDLPIMEKHINLE---------------IDAQDNPLASSSTTTSTTKGNISSSS
                           * ::**:*               :.:...  **:* ::*.*... ****

AT2G44940.1     TNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGG--GGKRRKT-----NGGDKHPTYRG
pt040183_POPTR_ TPISCIKHQGSKKEEN--SIAPRVSRKAQELQSSGNEGGKRRKTAENEKNG--KHPTYRG
                *  . *:.:.**:: .  *::. ** : :: *..*  *******     **  *******

AT2G44940.1     VRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGEL
pt040183_POPTR_ VRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPEFAHEL
                ********************************************** :******::* **

AT2G44940.1     PRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTT
pt040183_POPTR_ PPPLSKSPKDIQAAAAKAAAA---SFTETRYCEGEGGGEAELN---VSNL--SDSLAMDN
                * *:::*********: **.    *..:.  .*     *** .   *::*  **: :  .

AT2G44940.1     TQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGAD
pt040183_POPTR_ TQE--------SSSSPSTDSD---DTLFDLPDLFIDG---VHHSDGFCYYSSSWQLCAAD
                **.        :*:*..**.*   :.******** *    : :.*.******:****.**

AT2G44940.1     AGFRLEEPFFLSE
pt040183_POPTR_ TGFRLGEPFLWEY
                :**** ***: .
BoxShade v3.31 C (beta, 970507) Output
AT2G44940.1     - - - - - - - - - - - M A R Q I N I E S S V S Q V T F I S S A I P A V S S S S S I T A S A S L S S S P T T S S S S S S S
pt040183_POPTR_    M P L A L A R D L P I M E K H I N L E - - - - - - - - - - - - - - - I D A Q D N P L A S S S T T T S T T K G N I S S S S
 
AT2G44940.1     T N S N F I E E D N S K R K A S R R S L S S L V S V E D D D D Q N G G - - G G K R R K T - - - - - N G G D K H P T Y R G
pt040183_POPTR_    T P I S C I K H Q G S K K E E N - - S I A P R V S R K A Q E L Q S S G N E G G K R R K T A E N E K N G - - K H P T Y R G
 
AT2G44940.1     V R M R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G T T A Y L N F P K L A G E L
pt040183_POPTR_    V R M R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E F A H E L
 
AT2G44940.1     P R P V T N S P K D I Q A A A S L A A V N W Q D S V N D V S N S E V A E I V E A E P S R A V V A Q L F S S D T S T T T T
pt040183_POPTR_    P P P L S K S P K D I Q A A A A K A A A A - - - S F T E T R Y C E G E G G G E A E L N - - - V S N L - - S D S L A M D N
 
AT2G44940.1     T Q S Q E Y S E A S C A S T S A C T D K D S E E E K L F D L P D L F T D E N E M M I R N D A F C Y Y S S T W Q L C G A D
pt040183_POPTR_    T Q E - - - - - - - - S S S S P S T D S D - - - D T L F D L P D L F I D G - - - V H H S D G F C Y Y S S S W Q L C A A D
 
AT2G44940.1     A G F R L E E P F F L S E
pt040183_POPTR_    T G F R L G E P F L W E Y
 
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