fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016119 not found in 269aa AT2G44940.1 1st_1st 0.504926108 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G44940.1     MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSSSSTNSNFI-----
pt016119_POPTR_ MEKHIILEID--------------AQDNSLTSSSTSTTTTTTTTSSSSSSFSTTISYTDR
                * ::* :* .              :...*:*:*:: :::.**::*****: *. *     

AT2G44940.1     ---EEDNS--KRKASRRSLSSLVSVEDDDDQNGG-GGKRRKT----NGGDKHPTYRGVRM
pt016119_POPTR_ ISKKEENSIADPKGSRKS---------QELQSGNEGNKKRKTTRNENNG-KHPTYRGVRM
                   :*:**  . *.**:*         :: *.*. *.*:***    *.* **********

AT2G44940.1     RSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRP
pt016119_POPTR_ RSWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPELVDELPRP
                *******.*********************************** :******:*..*****

AT2G44940.1     VTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQS
pt016119_POPTR_ LSKSPKDIQAAAAKAAAA---SFPETRHCEAEAEAEADMSH---AELNVSNLSDNLAMDN
                :::*********: **.    *. :. :.*.   .**: *:   *:*  *: * . : :.

AT2G44940.1     -QEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGADAG
pt016119_POPTR_ IQE------SSSSPSTDVD---DKLFDLPDLFIDG---VNHSDGFCYYSPPWQLCSADTG
                 **      :*:*..** *   :********* *    : :.*.*****..****.**:*

AT2G44940.1     FRLEEPFFLSE
pt016119_POPTR_ FRLEEPFLWEY
                *******: .
BoxShade v3.31 C (beta, 970507) Output
AT2G44940.1     M A R Q I N I E S S V S Q V T F I S S A I P A V S S S S S I T A S A S L S S S P T T S S S S S S S T N S N F I - - - - -
pt016119_POPTR_    M E K H I I L E I D - - - - - - - - - - - - - - A Q D N S L T S S S T S T T T T T T T T S S S S S S F S T T I S Y T D R
 
AT2G44940.1     - - - E E D N S - - K R K A S R R S L S S L V S V E D D D D Q N G G - G G K R R K T - - - - N G G D K H P T Y R G V R M
pt016119_POPTR_    I S K K E E N S I A D P K G S R K S - - - - - - - - - Q E L Q S G N E G N K K R K T T R N E N N G - K H P T Y R G V R M
 
AT2G44940.1     R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G T T A Y L N F P K L A G E L P R P
pt016119_POPTR_    R S W G K W V C E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E L V D E L P R P
 
AT2G44940.1     V T N S P K D I Q A A A S L A A V N W Q D S V N D V S N S E V A E I V E A E P S R A V V A Q L F S S D T S T T T T T Q S
pt016119_POPTR_    L S K S P K D I Q A A A A K A A A A - - - S F P E T R H C E A E A E A E A D M S H - - - A E L N V S N L S D N L A M D N
 
AT2G44940.1     - Q E Y S E A S C A S T S A C T D K D S E E E K L F D L P D L F T D E N E M M I R N D A F C Y Y S S T W Q L C G A D A G
pt016119_POPTR_    I Q E - - - - - - S S S S P S T D V D - - - D K L F D L P D L F I D G - - - V N H S D G F C Y Y S P P W Q L C S A D T G
 
AT2G44940.1     F R L E E P F F L S E
pt016119_POPTR_    F R L E E P F L W E Y
 
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