fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016119 not found in 269aa AT2G44940.1 1st_1st 0.504926108 Ia
Pt040183 not found in 272aa AT2G44940.1 not_1st 0.485221674 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G44940.1     -----------MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSSSS
pt016119_POPTR_ -----------MEKHIILEIDAQDNSLTS------SSTSTTTTTTTTSSSSSSFSTTISY
pt040183_POPTR_ MPLALARDLPIMEKHINLEIDAQDNPLAS------SSTTTSTTKGNISSSSTPISCI---
                           * ::* :* ...: .: *      **::: *:. . ***.:. *     

AT2G44940.1     TNSNFIEEDNSKR--KASRRSLSSLVSVEDDDDQNGG--GGKRRKT-----NGGDKHPTY
pt016119_POPTR_ TDRISKKEENSIADPKGSRKS---------QELQ-SGNEGNKKRKTTRNENNG--KHPTY
pt040183_POPTR_ KHQGSKKEENSIA-PRVSRKA---------QELQSSGNEGGKRRKTAENEKNG--KHPTY
                ..    :*:**    : **::         :: * .*  *.*:***     **  *****

AT2G44940.1     RGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAG
pt016119_POPTR_ RGVRMRSWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPELVD
pt040183_POPTR_ RGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGGSAYLNFPEFAH
                ************.*********************************** :******::. 

AT2G44940.1     ELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTT
pt016119_POPTR_ ELPRPLSKSPKDIQAAAAKAAAA---SFPETRHCEAEAEAEADMS---HAELNVSNLSDN
pt040183_POPTR_ ELPPPLSKSPKDIQAAAAKAAAA---SFTETRYCEGEGGGE--------AELNVSNLSDS
                *** *:::*********: **.    *. :.  .*     *        *:*  *: * .

AT2G44940.1     TTTQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCG
pt016119_POPTR_ LAMDNIQES-----SSSPSTDVD---DKLFDLPDLFIDG---VNHSDGFCYYSPPWQLCS
pt040183_POPTR_ LAMDNTQES-----SSSPSTDSD---DTLFDLPDLFIDG---VHHSDGFCYYSSSWQLCA
                 : :. : *     *:*..** *   :.******** *    : :.*.*****..****.

AT2G44940.1     ADAGFRLEEPFFLSE
pt016119_POPTR_ ADTGFRLEEPFLWEY
pt040183_POPTR_ ADTGFRLGEPFLWEY
                **:**** ***: .
BoxShade v3.31 C (beta, 970507) Output
AT2G44940.1     - - - - - - - - - - - M A R Q I N I E S S V S Q V T F I S S A I P A V S S S S S I T A S A S L S S S P T T S S S S S S S
pt016119_POPTR_    - - - - - - - - - - - M E K H I I L E I D A Q D N S L T S - - - - - - S S T S T T T T T T T T S S S S S S F S T T I S Y
pt040183_POPTR_    M P L A L A R D L P I M E K H I N L E I D A Q D N P L A S - - - - - - S S T T T S T T K G N I S S S S T P I S C I - - -
 
AT2G44940.1     T N S N F I E E D N S K R - - K A S R R S L S S L V S V E D D D D Q N G G - - G G K R R K T - - - - - N G G D K H P T Y
pt016119_POPTR_    T D R I S K K E E N S I A D P K G S R K S - - - - - - - - - Q E L Q - S G N E G N K K R K T T R N E N N G - - K H P T Y
pt040183_POPTR_    K H Q G S K K E E N S I A - P R V S R K A - - - - - - - - - Q E L Q S S G N E G G K R R K T A E N E K N G - - K H P T Y
 
AT2G44940.1     R G V R M R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G T T A Y L N F P K L A G
pt016119_POPTR_    R G V R M R S W G K W V C E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E L V D
pt040183_POPTR_    R G V R M R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E F A H
 
AT2G44940.1     E L P R P V T N S P K D I Q A A A S L A A V N W Q D S V N D V S N S E V A E I V E A E P S R A V V A Q L F S S D T S T T
pt016119_POPTR_    E L P R P L S K S P K D I Q A A A A K A A A A - - - S F P E T R H C E A E A E A E A D M S - - - H A E L N V S N L S D N
pt040183_POPTR_    E L P P P L S K S P K D I Q A A A A K A A A A - - - S F T E T R Y C E G E G G G E - - - - - - - - A E L N V S N L S D S
 
AT2G44940.1     T T T Q S Q E Y S E A S C A S T S A C T D K D S E E E K L F D L P D L F T D E N E M M I R N D A F C Y Y S S T W Q L C G
pt016119_POPTR_    L A M D N I Q E S - - - - - S S S P S T D V D - - - D K L F D L P D L F I D G - - - V N H S D G F C Y Y S P P W Q L C S
pt040183_POPTR_    L A M D N T Q E S - - - - - S S S P S T D S D - - - D T L F D L P D L F I D G - - - V H H S D G F C Y Y S S S W Q L C A
 
AT2G44940.1     A D A G F R L E E P F F L S E
pt016119_POPTR_    A D T G F R L E E P F L W E Y
pt040183_POPTR_    A D T G F R L G E P F L W E Y
 
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