fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047086 FLDLPDLSLDLSHGAD in 191/232 AT5G11590.1 not_not 0.411330049 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G44940.1     --MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSS--SSTNSNFIE
gm047086_Glyma1 MVMEESNPLDNEVQPTT----------SSSSFTI-----TTPSTSSSSSIEEATNT----
                  * ..  ::..*. .*          ****:*      ::*:******  .:**:    

AT2G44940.1     EDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRGVRMRSWGKWVSEIR
gm047086_Glyma1 --TTKEKKKKRAISNIEG---------------------KHPTYRGVRMRQWGKWVSEIR
                  .:*.* .:*::*.: .                     ***********.*********

AT2G44940.1     EPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKDIQAA
gm047086_Glyma1 EPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAKLPRPASTSPKDIQAA
                ************:**.:***********:***::******:**.:****.:.********

AT2G44940.1     ASLA-AVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQSQEYSEASCAS
gm047086_Glyma1 AAKASALDFGHQSHE---------AESELSQAV-----------SSSIQTQSSSSSSNSS
                *: * *::: .. ::         .*:* *:**           ::: *:*. *.:* :*

AT2G44940.1     TSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA---DAGFRLEEPFF
gm047086_Glyma1 LKGVDD------TFLDLPDLSLDLSHGA---DEF-HYSSAWLVAGAEHIELGFRLEEPFL
                 ..  *      .::*****  * ..     * * :***:* :.**   : ********:

AT2G44940.1     LSE-
gm047086_Glyma1 WESY
                 ..
BoxShade v3.31 C (beta, 970507) Output
AT2G44940.1     - - M A R Q I N I E S S V S Q V T F I S S A I P A V S S S S S I T A S A S L S S S P T T S S S S S - - S S T N S N F I E
gm047086_Glyma1    M V M E E S N P L D N E V Q P T T - - - - - - - - - - S S S S F T I - - - - - T T P S T S S S S S I E E A T N T - - - -
 
AT2G44940.1     E D N S K R K A S R R S L S S L V S V E D D D D Q N G G G G K R R K T N G G D K H P T Y R G V R M R S W G K W V S E I R
gm047086_Glyma1    - - T T K E K K K K R A I S N I E G - - - - - - - - - - - - - - - - - - - - - K H P T Y R G V R M R Q W G K W V S E I R
 
AT2G44940.1     E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G T T A Y L N F P K L A G E L P R P V T N S P K D I Q A A
gm047086_Glyma1    E P R K K S R I W L G T F P T P D M A A R A H D V A A L T I K G S S A Y L N F P E L A A K L P R P A S T S P K D I Q A A
 
AT2G44940.1     A S L A - A V N W Q D S V N D V S N S E V A E I V E A E P S R A V V A Q L F S S D T S T T T T T Q S Q E Y S E A S C A S
gm047086_Glyma1    A A K A S A L D F G H Q S H E - - - - - - - - - A E S E L S Q A V - - - - - - - - - - - S S S I Q T Q S S S S S S N S S
 
AT2G44940.1     T S A C T D K D S E E E K L F D L P D L F T D E N E M M I R N D A F C Y Y S S T W Q L C G A - - - D A G F R L E E P F F
gm047086_Glyma1    L K G V D D - - - - - - T F L D L P D L S L D L S H G A - - - D E F - H Y S S A W L V A G A E H I E L G F R L E E P F L
 
AT2G44940.1     L S E -
gm047086_Glyma1    W E S Y
 
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