fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006781 not found in 287aa AT2G44940.1 1st_1st 0.472906403 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G44940.1     -----------------MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTS
gm006781_Glyma0 MHPPTHSFYTTLIKFSTMRKRINMESDADFNSFATST-PSIFFDTNTSSTSSSSSSSSSS
                                 * ::**:**...  :* :*: *::  .:. ::::* ***.::*

AT2G44940.1     SSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRGV
gm006781_Glyma0 SSTSPTSNKDSCTKEHTKTPQNDSTISQ-TSLENKEDSKECKKRQRDNSNQNHHPTYRGV
                **:*.::*.:   ::::*   .  ::*. .*:*:.:*.:    ::*.... ::*******

AT2G44940.1     RMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELP
gm006781_Glyma0 RMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELP
                ***.***************************************** :******:** ***

AT2G44940.1     RPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTT-TT
gm006781_Glyma0 RPASTSPKDIQAAASKAA---NTAFEVVKHCQITEEQEQEQNQA------EQETSSTLSM
                **.:.********** **   : :.: *.:.:::*  * * .:*      ..:**:* : 

AT2G44940.1     TQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGAD
gm006781_Glyma0 DNTQEPS-----SSHSTNDDDT----LFDLPDLFPDG------NNGLCSFSS-WHLCAVD
                 ::** *     *: : .*.*:    ********.*       *:.:* :** *:**..*

AT2G44940.1     AGFRLEEPFFLSE-
gm006781_Glyma0 SGFRLEESFFWENY
                :******.** .:
BoxShade v3.31 C (beta, 970507) Output
AT2G44940.1     - - - - - - - - - - - - - - - - - M A R Q I N I E S S V S Q V T F I S S A I P A V S S S S S I T A S A S L S S S P T T S
gm006781_Glyma0    M H P P T H S F Y T T L I K F S T M R K R I N M E S D A D F N S F A T S T - P S I F F D T N T S S T S S S S S S S S S S
 
AT2G44940.1     S S S S S S T N S N F I E E D N S K R K A S R R S L S S L V S V E D D D D Q N G G G G K R R K T N G G D K H P T Y R G V
gm006781_Glyma0    S S T S P T S N K D S C T K E H T K T P Q N D S T I S Q - T S L E N K E D S K E C K K R Q R D N S N Q N H H P T Y R G V
 
AT2G44940.1     R M R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G T T A Y L N F P K L A G E L P
gm006781_Glyma0    R M R N W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G H S A Y L N F P E L A Q E L P
 
AT2G44940.1     R P V T N S P K D I Q A A A S L A A V N W Q D S V N D V S N S E V A E I V E A E P S R A V V A Q L F S S D T S T T - T T
gm006781_Glyma0    R P A S T S P K D I Q A A A S K A A - - - N T A F E V V K H C Q I T E E Q E Q E Q N Q A - - - - - - E Q E T S S T L S M
 
AT2G44940.1     T Q S Q E Y S E A S C A S T S A C T D K D S E E E K L F D L P D L F T D E N E M M I R N D A F C Y Y S S T W Q L C G A D
gm006781_Glyma0    D N T Q E P S - - - - - S S H S T N D D D T - - - - L F D L P D L F P D G - - - - - - N N G L C S F S S - W H L C A V D
 
AT2G44940.1     A G F R L E E P F F L S E -
gm006781_Glyma0    S G F R L E E S F F W E N Y
 
0