fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G44940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006781 not found in 287aa AT2G44940.1 1st_1st 0.472906403 Ia
Gm018205 not found in 258aa AT2G44940.1 not_1st 0.470443349 II
Gm000882 not found in 263aa AT2G44940.1 not_1st 0.467980295 II
Gm011442 FLDLPDLSLDLSHGAD in 189/230 AT2G44940.1 not_1st 0.421182266 II
Gm047086 FLDLPDLSLDLSHGAD in 191/232 AT5G11590.1 not_not 0.411330049 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G44940.1     -----------------MARQINIESSVSQVTFISS---AIPAVSSSSSITASASLSSSP
gm000882_Glyma0 -----------------------MESDAGENLFGTF-------------SSSTTSITASS
gm011442_Glyma0 --------------------MVMEESNPLDNEVQPT-------------TSSSSFTITTP
gm006781_Glyma0 MHPPTHSFYTTLIKFSTMRKRINMESDADFNSFATS----TPSIFFDTNTSSTSSSSSSS
gm047086_Glyma1 --------------------MVMEESNPLDNEVQPT-------------TSSSSFTITTP
gm018205_Glyma0 -----------------MRKRINMESDADFNSFATSSSSTTPSIFFDTNTSST-------
                                        **.     . .               :::       

AT2G44940.1     TTSSSSSSSTNSNFIEEDNSKRK-ASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGD----
gm000882_Glyma0 SSSPTSSTTTSSNSCTKHDSKISPPQNQNTPNS--------------KKRQRSDDN-ENK
gm011442_Glyma0 STSSSSSIEEATN-TTKE-----------------------------KKKK-ANSN-EG-
gm006781_Glyma0 SSSSSTSPTSNKDSCTKEHTKT--PQNDSTISQTSLENKEDSK--ECKKRQRDNSN-QN-
gm047086_Glyma1 STSSSSSIEEATNTTTKE-----------------------------KKKKRAISNIEG-
gm018205_Glyma0 -SSSSTSPTSNSESCTKEHSKT--PQNDSTTSQTSLENGKDSK--GCKKRQIDNSN-QN-
                 :*.::*    .:   :.                             *:::   .:    

AT2G44940.1     KHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNF
gm000882_Glyma0 HHPSYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAVKGHSAFLNF
gm011442_Glyma0 KHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNF
gm006781_Glyma0 HHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNF
gm047086_Glyma1 KHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNF
gm018205_Glyma0 HHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNF
                :**:******* *********************:**.:***********::** :*:***

AT2G44940.1     PKLAGELPRPVTNSPKDIQAAASLAAVNWQ---DSVNDVS-NSE-VAEIVEAEPSRAVVA
gm000882_Glyma0 PNLAQDLPRPTTTSPKDIQAAAAKAATTTFFDDEIVNHCQ--AE-KAEQNHGEQQAS--P
gm011442_Glyma0 PELADELPRPASTSPKDIQAAAAKAAALDF---------------GHRSHDAESELS---
gm006781_Glyma0 PELAQELPRPASTSPKDIQAAASKAANTAF---EVVKHCQITEEQEQEQNQAEQETS---
gm047086_Glyma1 PELAAKLPRPASTSPKDIQAAAAKASALDF---------------GHQSHEAESELS---
gm018205_Glyma0 PELAQELPRPVSTSPKDIQAAAAKAANTAF---EEVRHCQITEE-EAEQNQAEQASS---
                *:** .****.:.*********: *:                     .  ..*   :   

AT2G44940.1     QLFS-SDTSTT-TTTQ------SQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEM
gm000882_Glyma0 STLCMMDNSTEAEQIQAEQASSTQESS-----SSHSTAD----EETLFDLPDLFPDGNSG
gm011442_Glyma0 RAVS--------SSIL------TQASS-----SSSNSSSLKGVDDTFLDLPDLSLDLSHG
gm006781_Glyma0 STLS-MDN--------------TQEPS-----SSHSTND----DDTLFDLPDLFPDGNNG
gm047086_Glyma1 QAVS--------SSIQ------TQSSS-----SSSN-SSLKGVDDTFLDLPDLSLDLSHG
gm018205_Glyma0 STLS-MDN--------------PQEPS-----SSHSTID----DDTLFDLPDLFPDGNNG
                  ..                  .*  *     *:    .    ::.::*****  * .  

AT2G44940.1     MIRNDAFCYYSSTWQLCG---ADAGFRLEEPFFLSE-
gm000882_Glyma0 L------FSYSSCWHLCA---VDSGFRLEEQFLWENF
gm011442_Glyma0 AD----EFHYSSAWLVAGAEHIELGFRLEDPFLWESY
gm006781_Glyma0 L------CSF-SSWHLCA---VDSGFRLEESFFWENY
gm047086_Glyma1 AD----EFHYSSAWLVAGAEHIELGFRLEEPFLWESY
gm018205_Glyma0 L------CSFSSSWHLCA---VDSGFRLE--------
                         : * * :..    : *****
BoxShade v3.31 C (beta, 970507) Output
AT2G44940.1     - - - - - - - - - - - - - - - - - M A R Q I N I E S S V S Q V T F I S S - - - A I P A V S S S S S I T A S A S L S S S P
gm000882_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - M E S D A G E N L F G T F - - - - - - - - - - - - - S S S T T S I T A S S
gm011442_Glyma0    - - - - - - - - - - - - - - - - - - - - M V M E E S N P L D N E V Q P T - - - - - - - - - - - - - T S S S S F T I T T P
gm006781_Glyma0    M H P P T H S F Y T T L I K F S T M R K R I N M E S D A D F N S F A T S - - - - T P S I F F D T N T S S T S S S S S S S
gm047086_Glyma1    - - - - - - - - - - - - - - - - - - - - M V M E E S N P L D N E V Q P T - - - - - - - - - - - - - T S S S S F T I T T P
gm018205_Glyma0    - - - - - - - - - - - - - - - - - M R K R I N M E S D A D F N S F A T S S S S T T P S I F F D T N T S S T - - - - - - -
 
AT2G44940.1     T T S S S S S S S T N S N F I E E D N S K R K - A S R R S L S S L V S V E D D D D Q N G G G G K R R K T N G G D - - - -
gm000882_Glyma0    S S S P T S S T T T S S N S C T K H D S K I S P P Q N Q N T P N S - - - - - - - - - - - - - - K K R Q R S D D N - E N K
gm011442_Glyma0    S T S S S S S I E E A T N - T T K E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K K K K - A N S N - E G -
gm006781_Glyma0    S S S S S T S P T S N K D S C T K E H T K T - - P Q N D S T I S Q T S L E N K E D S K - - E C K K R Q R D N S N - Q N -
gm047086_Glyma1    S T S S S S S I E E A T N T T T K E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K K K K R A I S N I E G -
gm018205_Glyma0    - S S S S T S P T S N S E S C T K E H S K T - - P Q N D S T T S Q T S L E N G K D S K - - G C K K R Q I D N S N - Q N -
 
AT2G44940.1     K H P T Y R G V R M R S W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G T T A Y L N F
gm000882_Glyma0    H H P S Y R G V R M R A W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A V K G H S A F L N F
gm011442_Glyma0    K H P T Y R G V R M R Q W G K W V S E I R E P R K K S R I W L G T F P T P D M A A R A H D V A A L T I K G S S A Y L N F
gm006781_Glyma0    H H P T Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G H S A Y L N F
gm047086_Glyma1    K H P T Y R G V R M R Q W G K W V S E I R E P R K K S R I W L G T F P T P D M A A R A H D V A A L T I K G S S A Y L N F
gm018205_Glyma0    H H P T Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T Y P T A E M A A R A H D V A A L A I K G H S A Y L N F
 
AT2G44940.1     P K L A G E L P R P V T N S P K D I Q A A A S L A A V N W Q - - - D S V N D V S - N S E - V A E I V E A E P S R A V V A
gm000882_Glyma0    P N L A Q D L P R P T T T S P K D I Q A A A A K A A T T T F F D D E I V N H C Q - - A E - K A E Q N H G E Q Q A S - - P
gm011442_Glyma0    P E L A D E L P R P A S T S P K D I Q A A A A K A A A L D F - - - - - - - - - - - - - - - G H R S H D A E S E L S - - -
gm006781_Glyma0    P E L A Q E L P R P A S T S P K D I Q A A A S K A A N T A F - - - E V V K H C Q I T E E Q E Q E Q N Q A E Q E T S - - -
gm047086_Glyma1    P E L A A K L P R P A S T S P K D I Q A A A A K A S A L D F - - - - - - - - - - - - - - - G H Q S H E A E S E L S - - -
gm018205_Glyma0    P E L A Q E L P R P V S T S P K D I Q A A A A K A A N T A F - - - E E V R H C Q I T E E - E A E Q N Q A E Q A S S - - -
 
AT2G44940.1     Q L F S - S D T S T T - T T T Q - - - - - - S Q E Y S E A S C A S T S A C T D K D S E E E K L F D L P D L F T D E N E M
gm000882_Glyma0    S T L C M M D N S T E A E Q I Q A E Q A S S T Q E S S - - - - - S S H S T A D - - - - E E T L F D L P D L F P D G N S G
gm011442_Glyma0    R A V S - - - - - - - - S S I L - - - - - - T Q A S S - - - - - S S S N S S S L K G V D D T F L D L P D L S L D L S H G
gm006781_Glyma0    S T L S - M D N - - - - - - - - - - - - - - T Q E P S - - - - - S S H S T N D - - - - D D T L F D L P D L F P D G N N G
gm047086_Glyma1    Q A V S - - - - - - - - S S I Q - - - - - - T Q S S S - - - - - S S S N - S S L K G V D D T F L D L P D L S L D L S H G
gm018205_Glyma0    S T L S - M D N - - - - - - - - - - - - - - P Q E P S - - - - - S S H S T I D - - - - D D T L F D L P D L F P D G N N G
 
AT2G44940.1     M I R N D A F C Y Y S S T W Q L C G - - - A D A G F R L E E P F F L S E -
gm000882_Glyma0    L - - - - - - F S Y S S C W H L C A - - - V D S G F R L E E Q F L W E N F
gm011442_Glyma0    A D - - - - E F H Y S S A W L V A G A E H I E L G F R L E D P F L W E S Y
gm006781_Glyma0    L - - - - - - C S F - S S W H L C A - - - V D S G F R L E E S F F W E N Y
gm047086_Glyma1    A D - - - - E F H Y S S A W L V A G A E H I E L G F R L E E P F L W E S Y
gm018205_Glyma0    L - - - - - - C S F S S S W H L C A - - - V D S G F R L E - - - - - - - -
 
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