fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021165 not found in 549aa AT2G45050.1 1st_1st 0.452088452 Ia
Gm018215 not found in 237aa AT2G45050.1 1st_1st 0.457002457 Ia
Pt017520 not found in 251aa AT2G45050.1 1st_1st 0.533169533 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45050.1     --------------------MDVYG-------LSSP------------------------
gm018215_Glyma0 --------------------MDLYG-----SFSTPS------------------------
Sb021165_Sorbi1 VRAMASEWEMAAMGVELGMGMGTYHHHNASSITTAPMSSHHSGAASYSTPHHHHHHYYGM
pt017520_POPTR_ --------------------MDVYGG---LSTTTAP------------------------
                                    *. *         :..                        

AT2G45050.1     -----DLLRIDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQNPSFHHH-------HLP
gm018215_Glyma0 -----DCLHIDDFLDFSN------------ITTDTHHHLPPPQNSPLISHDDANLFFNFP
Sb021165_Sorbi1 PPMGGDAMRVDDLLDLST-----------GAGAGAHDFFPTAAAATDKGHQHHSGAMGEP
pt017520_POPTR_ -----DYFHIDDLLDFSNDDLLSSPSS----SIDHHHHLPPPETSSIHHH-------HFP
                     * :::**:**:*.                    :*..  ..   *         *

AT2G45050.1     SS-------------ADH----HSFLHDICVPSDDAAHLEWLSQFVDD---SFADFPANP
gm018215_Glyma0 S-----------------------------VPTDEAAELEWLSQFVDDDATSFHSFP---
Sb021165_Sorbi1 SPT---------ANSSDHQTSLLSFADEFYIPSEEAAELEWLSKFVDD---SYSDMPNYS
pt017520_POPTR_ SSTYINNPSSLSTDFTDH----LS------VPTDDVAELEWLSQFVED---SFSDFP---
                *                             :*:::.*.*****:**:*   *: .:*   

AT2G45050.1     L------------------GGTMTSVKT-ETSFPGK-----PRSKRSRAPAPFAGTWSPM
gm018215_Glyma0 ---------------------ATASIGSHSTSFLSN-----NNNRNDNNEYPKSSLSSNI
Sb021165_Sorbi1 SAAHAAMAAAAAANAAAGNGGGGTSAGGQDSCVTGAAPGRGARSKRSRATAAAAAAWHSL
pt017520_POPTR_ ---------------------SIINIPT-DTSFCNK-----SRSKRSRATATTATSSSP-
                                        .    .:.. .       ..:...   . :      

AT2G45050.1     -PLESEHQQLHSA--AKFKPKKEQSGGG-GGGGGRHQSSSSETTE---------GGGMRR
gm018215_Glyma0 -PC-------SSAVAGKSRARREGSV-----------------TG---------DGGVRR
Sb021165_Sorbi1 VPRPPSQSSPSSSCSSSDFPSSNKPGGARGGNGSRGKKSPASPGGGPAGVEVGLEGGVRR
pt017520_POPTR_ --------ELETAVTGKSRLKKENNG------------APHSPAE---------EGTVRR
                           ::  ..     :                                * :**

AT2G45050.1     CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVM
gm018215_Glyma0 CSHCASEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLTQHSNSHRKVM
Sb021165_Sorbi1 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVM
pt017520_POPTR_ CTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTRHSNSHRKVL
                *:***********:***************:*****:******:*******:********:

AT2G45050.1     ELRRQKEVMRQPQQVQLH--------HHH---------------------------HPF-
gm018215_Glyma0 ELRRQKELLRHQQQQQLQQEQCHRHTHNH---------------------------HDFK
Sb021165_Sorbi1 ELRRQKELI------------LIRGSHSHRDAAAAAAAAAAAAAGSAAGPRPELIFRDYG
pt017520_POPTR_ ELRRQKEMTVGRQQQQQQ--------HGY---------------------------QGYE
                *******:                  * :                           : : 

AT2G45050.1     --
gm018215_Glyma0 VC
Sb021165_Sorbi1 VC
pt017520_POPTR_ VC
BoxShade v3.31 C (beta, 970507) Output
AT2G45050.1     - - - - - - - - - - - - - - - - - - - - M D V Y G - - - - - - - L S S P - - - - - - - - - - - - - - - - - - - - - - - -
gm018215_Glyma0    - - - - - - - - - - - - - - - - - - - - M D L Y G - - - - - S F S T P S - - - - - - - - - - - - - - - - - - - - - - - -
Sb021165_Sorbi1    V R A M A S E W E M A A M G V E L G M G M G T Y H H H N A S S I T T A P M S S H H S G A A S Y S T P H H H H H H Y Y G M
pt017520_POPTR_    - - - - - - - - - - - - - - - - - - - - M D V Y G G - - - L S T T T A P - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G45050.1     - - - - - D L L R I D D L L D F S N E D I F S A S S S G G S T A A T S S S S F P P P Q N P S F H H H - - - - - - - H L P
gm018215_Glyma0    - - - - - D C L H I D D F L D F S N - - - - - - - - - - - - I T T D T H H H L P P P Q N S P L I S H D D A N L F F N F P
Sb021165_Sorbi1    P P M G G D A M R V D D L L D L S T - - - - - - - - - - - G A G A G A H D F F P T A A A A T D K G H Q H H S G A M G E P
pt017520_POPTR_    - - - - - D Y F H I D D L L D F S N D D L L S S P S S - - - - S I D H H H H L P P P E T S S I H H H - - - - - - - H F P
 
AT2G45050.1     S S - - - - - - - - - - - - - A D H - - - - H S F L H D I C V P S D D A A H L E W L S Q F V D D - - - S F A D F P A N P
gm018215_Glyma0    S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V P T D E A A E L E W L S Q F V D D D A T S F H S F P - - -
Sb021165_Sorbi1    S P T - - - - - - - - - A N S S D H Q T S L L S F A D E F Y I P S E E A A E L E W L S K F V D D - - - S Y S D M P N Y S
pt017520_POPTR_    S S T Y I N N P S S L S T D F T D H - - - - L S - - - - - - V P T D D V A E L E W L S Q F V E D - - - S F S D F P - - -
 
AT2G45050.1     L - - - - - - - - - - - - - - - - - - G G T M T S V K T - E T S F P G K - - - - - P R S K R S R A P A P F A G T W S P M
gm018215_Glyma0    - - - - - - - - - - - - - - - - - - - - - A T A S I G S H S T S F L S N - - - - - N N N R N D N N E Y P K S S L S S N I
Sb021165_Sorbi1    S A A H A A M A A A A A A N A A A G N G G G G T S A G G Q D S C V T G A A P G R G A R S K R S R A T A A A A A A W H S L
pt017520_POPTR_    - - - - - - - - - - - - - - - - - - - - - S I I N I P T - D T S F C N K - - - - - S R S K R S R A T A T T A T S S S P -
 
AT2G45050.1     - P L E S E H Q Q L H S A - - A K F K P K K E Q S G G G - G G G G G R H Q S S S S E T T E - - - - - - - - - G G G M R R
gm018215_Glyma0    - P C - - - - - - - S S A V A G K S R A R R E G S V - - - - - - - - - - - - - - - - - T G - - - - - - - - - D G G V R R
Sb021165_Sorbi1    V P R P P S Q S S P S S S C S S S D F P S S N K P G G A R G G N G S R G K K S P A S P G G G P A G V E V G L E G G V R R
pt017520_POPTR_    - - - - - - - - E L E T A V T G K S R L K K E N N G - - - - - - - - - - - - A P H S P A E - - - - - - - - - E G T V R R
 
AT2G45050.1     C T H C A S E K T P Q W R T G P L G P K T L C N A C G V R F K S G R L V P E Y R P A S S P T F V L T Q H S N S H R K V M
gm018215_Glyma0    C S H C A S E K T P Q W R A G P L G P K T L C N A C G V R F K S G R L V P E Y R P A A S P T F V L T Q H S N S H R K V M
Sb021165_Sorbi1    C T H C A S E K T P Q W R T G P L G P K T L C N A C G V R F K S G R L M P E Y R P A A S P T F V L T Q H S N S H R K V M
pt017520_POPTR_    C T H C A S E K T P Q W R T G P L G P K T L C N A C G V R Y K S G R L V P E Y R P A A S P T F V L T R H S N S H R K V L
 
AT2G45050.1     E L R R Q K E V M R Q P Q Q V Q L H - - - - - - - - H H H - - - - - - - - - - - - - - - - - - - - - - - - - - - H P F -
gm018215_Glyma0    E L R R Q K E L L R H Q Q Q Q Q L Q Q E Q C H R H T H N H - - - - - - - - - - - - - - - - - - - - - - - - - - - H D F K
Sb021165_Sorbi1    E L R R Q K E L I - - - - - - - - - - - - L I R G S H S H R D A A A A A A A A A A A A A G S A A G P R P E L I F R D Y G
pt017520_POPTR_    E L R R Q K E M T V G R Q Q Q Q Q Q - - - - - - - - H G Y - - - - - - - - - - - - - - - - - - - - - - - - - - - Q G Y E
 
AT2G45050.1     - -
gm018215_Glyma0    V C
Sb021165_Sorbi1    V C
pt017520_POPTR_    V C
 
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