fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os036980 not found in 187aa AT2G45050.1 1st_1st 0.383292383 Ib
Sm018168 not found in 67aa AT2G45050.1 1st_1st 0.307125307 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45050.1     MDVYGLSSPDLLRIDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQNPSFHHHHLPSSA
Sm018168_Selmo1 ------------------------------------------------------------
Os036980_Os10t0 -----MSSG--------LPVAAADPAAAAAAAAAAAAAAS--------------------
                                                                            

AT2G45050.1     DHHSFLHDICVPSDDAAHLEWLSQFVDDSFADFPANPLGGTMTSVKTETSFPGKPRSKRS
Sm018168_Selmo1 ------------------------------------------------------------
Os036980_Os10t0 -------------------RWLPRMMRSSF------------------------------
                                                                            

AT2G45050.1     RAPAPFAGTW--SPMPLESEHQQLHSAAKFKPKKEQSGGGGGGGGRHQSSSSETTEGGGM
Sm018168_Selmo1 ------------------------------------------------------------
Os036980_Os10t0 ---------WRRSSMTLRWE----------------------------------------
                                                                            

AT2G45050.1     RRCTHCASEK------------------TPQWRTGPLGPKTLCNACGVRFKSGRLVPEYR
Sm018168_Selmo1 RKCSHCQTQK------------------TPQWRAGPLGPKTLCNACGVRFKSGRLLPEYR
Os036980_Os10t0 LEC--CVSTNVGLAAGLYSGISRPDLNLTPHALHRVLGPRGPVRHCGV-FSDAQCVHRRT
                 .*  * : :                  **:     ***:   . *** *...: : .  

AT2G45050.1     PASSPT---------------------------FVLTQHSNSH----------RKVMELR
Sm018168_Selmo1 PAGSPS---------------------------FVSDKHSNSH----------RKVLEMR
Os036980_Os10t0 PASMPTSAPAGPGLFLPRLPPPEPFGLAVPDGLFEDGKSDDEHDDDGDDWDGGRGTRECH
                **. *:                           *   : .:.*          * . * :

AT2G45050.1     RQKE-------VMRQPQQVQLHHHHHPF
Sm018168_Selmo1 RQ--------------------------
Os036980_Os10t0 AAAAAAVARDLLLRAPRPGAA-------
BoxShade v3.31 C (beta, 970507) Output
AT2G45050.1     M D V Y G L S S P D L L R I D D L L D F S N E D I F S A S S S G G S T A A T S S S S F P P P Q N P S F H H H H L P S S A
Sm018168_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os036980_Os10t0    - - - - - M S S G - - - - - - - - L P V A A A D P A A A A A A A A A A A A A A S - - - - - - - - - - - - - - - - - - - -
 
AT2G45050.1     D H H S F L H D I C V P S D D A A H L E W L S Q F V D D S F A D F P A N P L G G T M T S V K T E T S F P G K P R S K R S
Sm018168_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os036980_Os10t0    - - - - - - - - - - - - - - - - - - - R W L P R M M R S S F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G45050.1     R A P A P F A G T W - - S P M P L E S E H Q Q L H S A A K F K P K K E Q S G G G G G G G G R H Q S S S S E T T E G G G M
Sm018168_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os036980_Os10t0    - - - - - - - - - W R R S S M T L R W E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G45050.1     R R C T H C A S E K - - - - - - - - - - - - - - - - - - T P Q W R T G P L G P K T L C N A C G V R F K S G R L V P E Y R
Sm018168_Selmo1    R K C S H C Q T Q K - - - - - - - - - - - - - - - - - - T P Q W R A G P L G P K T L C N A C G V R F K S G R L L P E Y R
Os036980_Os10t0    L E C - - C V S T N V G L A A G L Y S G I S R P D L N L T P H A L H R V L G P R G P V R H C G V - F S D A Q C V H R R T
 
AT2G45050.1     P A S S P T - - - - - - - - - - - - - - - - - - - - - - - - - - - F V L T Q H S N S H - - - - - - - - - - R K V M E L R
Sm018168_Selmo1    P A G S P S - - - - - - - - - - - - - - - - - - - - - - - - - - - F V S D K H S N S H - - - - - - - - - - R K V L E M R
Os036980_Os10t0    P A S M P T S A P A G P G L F L P R L P P P E P F G L A V P D G L F E D G K S D D E H D D D G D D W D G G R G T R E C H
 
AT2G45050.1     R Q K E - - - - - - - V M R Q P Q Q V Q L H H H H H P F
Sm018168_Selmo1    R Q - - - - - - - - - - - - - - - - - - - - - - - - - -
Os036980_Os10t0    A A A A A A V A R D L L L R A P R P G A A - - - - - - -
 
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