fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017520 not found in 251aa AT2G45050.1 1st_1st 0.533169533 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45050.1     MDVYG----LSSPDLLRIDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQNPSFHHHHL
pt017520_POPTR_ MDVYGGLSTTTAPDYFHIDDLLDFSNDDLLSSPSS----SIDHHHHLPPPETSSIHHHHF
                *****     ::** ::*********:*::*:.**    :      :***:..*:****:

AT2G45050.1     PSS-------------ADHHSFLHDICVPSDDAAHLEWLSQFVDDSFADFPANPLGGTMT
pt017520_POPTR_ PSSTYINNPSSLSTDFTDHLS------VPTDDVAELEWLSQFVEDSFSDFP------SII
                ***             :** *      **:**.*.********:***:***      :: 

AT2G45050.1     SVKTETSFPGKPRSKRSRAPAPFAGTWSPMPLESEHQQLHSA--AKFKPKKEQSGGGGGG
pt017520_POPTR_ NIPTDTSFCNKSRSKRSRATATTATSSSP--------ELETAVTGKSRLKKENNG-----
                .: *:*** .*.*******.*. * : **        :*.:*  .* : ***:.*     

AT2G45050.1     GGRHQSSSSETTEGGGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRP
pt017520_POPTR_ ------APHSPAEEGTVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRP
                      :. ..:* * :*******************************:***********

AT2G45050.1     ASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQVQLHHHHHPF---
pt017520_POPTR_ AASPTFVLTRHSNSHRKVLELRRQKEMTVGRQQQQQQHGYQGYEVC
                *:*******:********:*******:    ** * :* :: :
BoxShade v3.31 C (beta, 970507) Output
AT2G45050.1     M D V Y G - - - - L S S P D L L R I D D L L D F S N E D I F S A S S S G G S T A A T S S S S F P P P Q N P S F H H H H L
pt017520_POPTR_    M D V Y G G L S T T T A P D Y F H I D D L L D F S N D D L L S S P S S - - - - S I D H H H H L P P P E T S S I H H H H F
 
AT2G45050.1     P S S - - - - - - - - - - - - - A D H H S F L H D I C V P S D D A A H L E W L S Q F V D D S F A D F P A N P L G G T M T
pt017520_POPTR_    P S S T Y I N N P S S L S T D F T D H L S - - - - - - V P T D D V A E L E W L S Q F V E D S F S D F P - - - - - - S I I
 
AT2G45050.1     S V K T E T S F P G K P R S K R S R A P A P F A G T W S P M P L E S E H Q Q L H S A - - A K F K P K K E Q S G G G G G G
pt017520_POPTR_    N I P T D T S F C N K S R S K R S R A T A T T A T S S S P - - - - - - - - E L E T A V T G K S R L K K E N N G - - - - -
 
AT2G45050.1     G G R H Q S S S S E T T E G G G M R R C T H C A S E K T P Q W R T G P L G P K T L C N A C G V R F K S G R L V P E Y R P
pt017520_POPTR_    - - - - - - A P H S P A E E G T V R R C T H C A S E K T P Q W R T G P L G P K T L C N A C G V R Y K S G R L V P E Y R P
 
AT2G45050.1     A S S P T F V L T Q H S N S H R K V M E L R R Q K E V M R Q P Q Q V Q L H H H H H P F - - -
pt017520_POPTR_    A A S P T F V L T R H S N S H R K V L E L R R Q K E M T V G R Q Q Q Q Q Q H G Y Q G Y E V C
 
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