fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006797 not found in 226aa AT2G45050.1 not_1st 0.432432432 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45050.1     MDVYG-LSSP-DLLRIDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQN-PSFHHHHLP
gm006797_Glyma0 MDLYGSFSTPSDCLHIDDFLDFSNIT---------TTTTDTHHHFPPPQNSPSISH----
                **:** :*:* * *:***:*****           :*:: :   ****** **: *    

AT2G45050.1     SSADHHSFLHDICVPSDDAAHLEWLSQFVDD---SFADFPANPLGGTMTSVKTETSFPGK
gm006797_Glyma0 ---DPNFFLNFPSVPSDEAVELEWLSQFVNDEATSFHNIPPPASIGSHT-----TPFLSN
                   * : **:  .****:*..********:*   ** ::*. .  *: *     *.* .:

AT2G45050.1     PRSKRSRAPAPFAGTWSPMPLESEHQQLHSAAKFKPKKEQSGGGGGGGGRHQSSSSETTE
gm006797_Glyma0 NNRNDNNNEYPKSSSSSPV----------LAGKSRARREGS-----------------VT
                 . : ..   * :.: **:           *.* :.::* *                 . 

AT2G45050.1     GGGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSN
gm006797_Glyma0 GDGVRRCSHCATDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVMTQHSN
                *.*:***:***::***********************************:*****:*****

AT2G45050.1     SHRKVMELRRQKEVMRQPQQVQLHHH-HHPF---
gm006797_Glyma0 SHRKVMELRRQKELLRHQQQEQCYRHTHHDFKVC
                *************::*: ** * ::* ** *
BoxShade v3.31 C (beta, 970507) Output
AT2G45050.1     M D V Y G - L S S P - D L L R I D D L L D F S N E D I F S A S S S G G S T A A T S S S S F P P P Q N - P S F H H H H L P
gm006797_Glyma0    M D L Y G S F S T P S D C L H I D D F L D F S N I T - - - - - - - - - T T T T D T H H H F P P P Q N S P S I S H - - - -
 
AT2G45050.1     S S A D H H S F L H D I C V P S D D A A H L E W L S Q F V D D - - - S F A D F P A N P L G G T M T S V K T E T S F P G K
gm006797_Glyma0    - - - D P N F F L N F P S V P S D E A V E L E W L S Q F V N D E A T S F H N I P P P A S I G S H T - - - - - T P F L S N
 
AT2G45050.1     P R S K R S R A P A P F A G T W S P M P L E S E H Q Q L H S A A K F K P K K E Q S G G G G G G G G R H Q S S S S E T T E
gm006797_Glyma0    N N R N D N N N E Y P K S S S S S P V - - - - - - - - - - L A G K S R A R R E G S - - - - - - - - - - - - - - - - - V T
 
AT2G45050.1     G G G M R R C T H C A S E K T P Q W R T G P L G P K T L C N A C G V R F K S G R L V P E Y R P A S S P T F V L T Q H S N
gm006797_Glyma0    G D G V R R C S H C A T D K T P Q W R T G P L G P K T L C N A C G V R F K S G R L V P E Y R P A A S P T F V M T Q H S N
 
AT2G45050.1     S H R K V M E L R R Q K E V M R Q P Q Q V Q L H H H - H H P F - - -
gm006797_Glyma0    S H R K V M E L R R Q K E L L R H Q Q Q E Q C Y R H T H H D F K V C
 
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