fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45190.1 LPASNQLQLQLGPHSY at 74/229 in AT2G45190.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os036589 not found in 313aa AT4G00180.1 not_not 0.453724604 III
Sb029682 not found in 431aa AT4G00180.1 not_not 0.440180586 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45190.1     -----MSMSSMSSPSSAVCSPDHFSPS---------------------------------
Os036589_Os10t0 -----MSSSSSSSASSAAAAA--FRPAVVQREQQ--VVEEKFPAAAAAMREMVLPPVAAA
Sb029682_Sorbi1 AAQARRSTGSFASFGAMMSSV----PETFNLDQQHLVVQQQQP-----------PP----
                      * .* :* .:  .:     *                                  

AT2G45190.1     ------DHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQL
Os036589_Os10t0 AADSEQEQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLPTTAAA
Sb029682_Sorbi1 ---AEQEQICYVHCSYCDTILAVGVPCSSLFQTVTVRCGHCSNLLYVNLRALLLPAAANQ
                      :::***:* :*:*:*.*.** :***:******* *:.** **:*. :**::   

AT2G45190.1     ---------------------QLQLGPHSYFNPQDILE--ELRDAPSNMNMMMMNQHPTM
Os036589_Os10t0 APPPPPPPPPPPPPPAAHFPHSLNLAPANPPHHHSLLD--EISTANSP-TQLLLEQHGLG
Sb029682_Sorbi1 LPP---------------FGGQALLSPTS---PHGLLDAETMSSFQAP-RSLQPSTDPPS
                                     .  *.* .    :.:*:   :    :    :  . .   

AT2G45190.1     NDIPSFMDLH------QQHE--IPKAPP---------------------VNRPPEKRQRV
Os036589_Os10t0 GLMASAASCR------NNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRV
Sb029682_Sorbi1 ACVSTITSINNTCGGGNSASAMSSMAPPPP---AKPALLEPQLPKSAASGNKTSEKRQRV
                  :.:  . .      :. .   . ***                      *:..******

AT2G45190.1     PSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTN-MPQ
Os036589_Os10t0 PSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLLPQ
Sb029682_Sorbi1 PSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPD-QGLKKNP-MQN
                *********:*******.****:**********************:** * :**.  : :

AT2G45190.1     QEGEDNMVMKEGFY-----APAAA-------NVGVTPY
Os036589_Os10t0 DHQRKDGLLKEGLYAAAAAAAAAA-------NMGVAPY
Sb029682_Sorbi1 QEGAECMLFKDGLYAAAAAAAAAAAAATAASGMGISPF
                :.  .  ::*:*:*     *.***       .:*::*:
BoxShade v3.31 C (beta, 970507) Output
AT2G45190.1     - - - - - M S M S S M S S P S S A V C S P D H F S P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os036589_Os10t0    - - - - - M S S S S S S S A S S A A A A A - - F R P A V V Q R E Q Q - - V V E E K F P A A A A A M R E M V L P P V A A A
Sb029682_Sorbi1    A A Q A R R S T G S F A S F G A M M S S V - - - - P E T F N L D Q Q H L V V Q Q Q Q P - - - - - - - - - - - P P - - - -
 
AT2G45190.1     - - - - - - D H L C Y V Q C N F C Q T I L A V N V P Y T S L F K T V T V R C G C C T N L L S V N M R S Y V L P A S N Q L
Os036589_Os10t0    A A D S E Q E Q L C Y V H C H Y C D T V L V V S V P S S S L F E T V T V R C G H C S S L L T V N M R G L L L P T T A A A
Sb029682_Sorbi1    - - - A E Q E Q I C Y V H C S Y C D T I L A V G V P C S S L F Q T V T V R C G H C S N L L Y V N L R A L L L P A A A N Q
 
AT2G45190.1     - - - - - - - - - - - - - - - - - - - - - Q L Q L G P H S Y F N P Q D I L E - - E L R D A P S N M N M M M M N Q H P T M
Os036589_Os10t0    A P P P P P P P P P P P P P P A A H F P H S L N L A P A N P P H H H S L L D - - E I S T A N S P - T Q L L L E Q H G L G
Sb029682_Sorbi1    L P P - - - - - - - - - - - - - - - F G G Q A L L S P T S - - - P H G L L D A E T M S S F Q A P - R S L Q P S T D P P S
 
AT2G45190.1     N D I P S F M D L H - - - - - - Q Q H E - - I P K A P P - - - - - - - - - - - - - - - - - - - - - V N R P P E K R Q R V
Os036589_Os10t0    G L M A S A A S C R - - - - - - N N N S P A A A A A P P P P T S Q G K A A A K E P S P R T N T A V I N R P P E K R Q R V
Sb029682_Sorbi1    A C V S T I T S I N N T C G G G N S A S A M S S M A P P P P - - - A K P A L L E P Q L P K S A A S G N K T S E K R Q R V
 
AT2G45190.1     P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L V P D N Q P V K K T N - M P Q
Os036589_Os10t0    P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D H Q G L K K T S L L P Q
Sb029682_Sorbi1    P S A Y N R F I K D E I Q R I K A S N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D - Q G L K K N P - M Q N
 
AT2G45190.1     Q E G E D N M V M K E G F Y - - - - - A P A A A - - - - - - - N V G V T P Y
Os036589_Os10t0    D H Q R K D G L L K E G L Y A A A A A A A A A A - - - - - - - N M G V A P Y
Sb029682_Sorbi1    Q E G A E C M L F K D G L Y A A A A A A A A A A A A A T A A S G M G I S P F
 
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