fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45190.1 LPASNQLQLQLGPHSY at 74/229 in AT2G45190.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008985 not found in 256aa AT2G45190.1 1st_1st 0.505643340 Ia
Gm001387 not found in 215aa AT2G45190.1 1st_1st 0.652370203 Ia
Pt016250 not found in 212aa AT2G45190.1 1st_1st 0.632054176 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45190.1     MSMSSMSSPSSAVCSPD-HF---SPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGC
gm001387_Glyma0 -----MSS-SSTSFSPDQHL---SPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGH
pt016250_POPTR_ -----MAS-SSAAFSPD-HL---SSSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGH
Os008985_Os02t0 --MSSSSS-SSAVFPLD-HLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGH
                      :* **:  . * *:   *.:::****:** *:*:***.** :*********** 

AT2G45190.1     CTNLLSVNMRSYVLPA-----SNQLQLQLGPHSYFNPQ-DILEELRD--APSNMNMMMMN
gm001387_Glyma0 CTNLLSVNMRGLLLPS-----ANQLHLG---HSFFTPQ-NLLEEIRN--APST--NMMMN
pt016250_POPTR_ CTNLFSVNMRS-LLPA-----ANQFYLG---HGFFNPQINILEGMRSTGAPPS---LMIN
Os008985_Os02t0 CANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPH-GLLDEVAFQ-TPS----LLME
                *:**:***:*. :**:     :**: :     .  .*: .:*: :    :*.    ::::

AT2G45190.1     Q--------------------HPTMNDIPSFMDLH--QQHEIPK--APPVNRPPEKRQRV
gm001387_Glyma0 Q--------------------LPNPND--LVMSTMRGGPEETPK--PPSANRPPEKRQRV
pt016250_POPTR_ Q---------------------PNPNE--SVMPIR--GVEEIPK--PPVVNRPPEKRQRV
Os008985_Os02t0 QAASASLSSITGRSSSSCASNAPAMQM-PPAKPVQ--QEPELPKNAPASANRPPEKRQRV
                *                     *  :              * **  .. .**********

AT2G45190.1     PSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQ
gm001387_Glyma0 PSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDNQPVKKANVR-Q
pt016250_POPTR_ PSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPD-QPVKKTNVRQQ
Os008985_Os02t0 PSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPD-QGFKKTFKPQD
                *********:***********************************:** * .**:    :

AT2G45190.1     EGEDNMVMKEGFYAPA------AANVGVTPY
gm001387_Glyma0 EAED-VLMKDGFFAP--------ANVGVSPY
pt016250_POPTR_ EGED-VLMKDGFFAP--------ANVGVTPY
Os008985_Os02t0 GSED-ILLKDSLYAAAAAAAAAAANMGVTPF
                 .** :::*:.::*.        **:**:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G45190.1     M S M S S M S S P S S A V C S P D - H F - - - S P S D H L C Y V Q C N F C Q T I L A V N V P Y T S L F K T V T V R C G C
gm001387_Glyma0    - - - - - M S S - S S T S F S P D Q H L - - - S P S D Q L C Y V H C N F C D T V L A V S V P C T S L F K T V T V R C G H
pt016250_POPTR_    - - - - - M A S - S S A A F S P D - H L - - - S S S D Q L C Y V H C N F C D T V L A V S V P C S S L F K T V T V R C G H
Os008985_Os02t0    - - M S S S S S - S S A V F P L D - H L A A P S P T E Q L C Y V H C N C C D T I L A V G V P C S S L F K T V T V R C G H
 
AT2G45190.1     C T N L L S V N M R S Y V L P A - - - - - S N Q L Q L Q L G P H S Y F N P Q - D I L E E L R D - - A P S N M N M M M M N
gm001387_Glyma0    C T N L L S V N M R G L L L P S - - - - - A N Q L H L G - - - H S F F T P Q - N L L E E I R N - - A P S T - - N M M M N
pt016250_POPTR_    C T N L F S V N M R S - L L P A - - - - - A N Q F Y L G - - - H G F F N P Q I N I L E G M R S T G A P P S - - - L M I N
Os008985_Os02t0    C A N L L S V N L R G L L L P A P A P A P A N Q L H F G P S L L S P T S P H - G L L D E V A F Q - T P S - - - - L L M E
 
AT2G45190.1     Q - - - - - - - - - - - - - - - - - - - - H P T M N D I P S F M D L H - - Q Q H E I P K - - A P P V N R P P E K R Q R V
gm001387_Glyma0    Q - - - - - - - - - - - - - - - - - - - - L P N P N D - - L V M S T M R G G P E E T P K - - P P S A N R P P E K R Q R V
pt016250_POPTR_    Q - - - - - - - - - - - - - - - - - - - - - P N P N E - - S V M P I R - - G V E E I P K - - P P V V N R P P E K R Q R V
Os008985_Os02t0    Q A A S A S L S S I T G R S S S S C A S N A P A M Q M - P P A K P V Q - - Q E P E L P K N A P A S A N R P P E K R Q R V
 
AT2G45190.1     P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L V P D N Q P V K K T N M P Q Q
gm001387_Glyma0    P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D N Q P V K K A N V R - Q
pt016250_POPTR_    P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D - Q P V K K T N V R Q Q
Os008985_Os02t0    P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D - Q G F K K T F K P Q D
 
AT2G45190.1     E G E D N M V M K E G F Y A P A - - - - - - A A N V G V T P Y
gm001387_Glyma0    E A E D - V L M K D G F F A P - - - - - - - - A N V G V S P Y
pt016250_POPTR_    E G E D - V L M K D G F F A P - - - - - - - - A N V G V T P Y
Os008985_Os02t0    G S E D - I L L K D S L Y A A A A A A A A A A A N M G V T P F
 
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