fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45190.1 LPASNQLQLQLGPHSY at 74/229 in AT2G45190.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010908 MSSSSTLSLDLLPSSE in 6/213 AT2G45190.1 not_1st 0.559819413 II
Pt033007 not found in 214aa AT2G45190.1 not_1st 0.544018058 II
Pt040476 not found in 167aa AT2G45190.1 not_1st 0.496613995 II
Pt016251 not found in 165aa AT2G45190.1 not_1st 0.460496613 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45190.1     MSMSSMSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNL
pt016251_POPTR_ -----MAS-SSAAFSPDHLSSSDQLCYVHCNFCDTVLAINI-------------------
pt033007_POPTR_ -----MSS-SS-SLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNL
pt040476_POPTR_ -----MSS-SSAAFGPDHLSSSEQLCYVHCNFCDTVLAVSVPCTSLYKTVAVRCGHCTNL
pt010908_POPTR_ -----MSS-SS-TLSLDLLPSSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNL
                     *:* **   . * :..*::****:**:*:*:**:.:                   

AT2G45190.1     LSVNMRSYVLPASNQLQLQLGPHSYFNP-QDIL-EELRDA-PSNMNMMMMNQHPTMNDIP
pt016251_POPTR_ ----LEGM--------------RSTGAP-------------PS----LMINQ-PNPNESV
pt033007_POPTR_ LPVNMRGLFLPSASQFPL---GHNLYSPSHNLLDDQIPNPTPN----FLINQ-THVNDFS
pt040476_POPTR_ LSVSMHGL-LPAANQFYL---GHGFFNP-QNIL---------------------------
pt010908_POPTR_ LPVNMRGLLLPSANQFHL---GHSFFSPSHNLL-DEIPNPTPN----FLINQ-TNVNDFS
                    :..               :.   *                                

AT2G45190.1     SFMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAK
pt016251_POPTR_ MPIRGV--EEIPKPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAK
pt033007_POPTR_ VTVRGMADHELPRPPVIHRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAK
pt040476_POPTR_ -----------------------RHRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAK
pt010908_POPTR_ VPVRGMADHELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAK
                                       *:***********:***********************

AT2G45190.1     NWAHFPHIHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFYAPAAANVGV-TPY
pt016251_POPTR_ NWAHFPHIHFGLMPD-QPVKKTNVRQQEGED-VLMKDGFFAP--ANVGV-TPY
pt033007_POPTR_ NWAHFPHIHFGLMPD-QAMKKNNVRQQEGED-VLINDGFFAS--SNVGVTTPY
pt040476_POPTR_ NWAHFPHIHFGLMPD-QPVKKANVRQQEGED-VLMTDEFFAA--ANVGV-TPY
pt010908_POPTR_ NWAHFPHIHFGLMPD-QMVKKTNVRQQEGED-VLMKDGFFSS--ANAGVPTPY
                ************:** * :** *: ****** :::.: *::.  :*.** ***
BoxShade v3.31 C (beta, 970507) Output
AT2G45190.1     M S M S S M S S P S S A V C S P D H F S P S D H L C Y V Q C N F C Q T I L A V N V P Y T S L F K T V T V R C G C C T N L
pt016251_POPTR_    - - - - - M A S - S S A A F S P D H L S S S D Q L C Y V H C N F C D T V L A I N I - - - - - - - - - - - - - - - - - - -
pt033007_POPTR_    - - - - - M S S - S S - S L S L D H L P P S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G H C T N L
pt040476_POPTR_    - - - - - M S S - S S A A F G P D H L S S S E Q L C Y V H C N F C D T V L A V S V P C T S L Y K T V A V R C G H C T N L
pt010908_POPTR_    - - - - - M S S - S S - T L S L D L L P S S E Q L C Y V H C N I C D T V L A V S V P C T S L F K T V T V R C G H C T N L
 
AT2G45190.1     L S V N M R S Y V L P A S N Q L Q L Q L G P H S Y F N P - Q D I L - E E L R D A - P S N M N M M M M N Q H P T M N D I P
pt016251_POPTR_    - - - - L E G M - - - - - - - - - - - - - - R S T G A P - - - - - - - - - - - - - P S - - - - L M I N Q - P N P N E S V
pt033007_POPTR_    L P V N M R G L F L P S A S Q F P L - - - G H N L Y S P S H N L L D D Q I P N P T P N - - - - F L I N Q - T H V N D F S
pt040476_POPTR_    L S V S M H G L - L P A A N Q F Y L - - - G H G F F N P - Q N I L - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt010908_POPTR_    L P V N M R G L L L P S A N Q F H L - - - G H S F F S P S H N L L - D E I P N P T P N - - - - F L I N Q - T N V N D F S
 
AT2G45190.1     S F M D L H Q Q H E I P K A P P V N R P P E K R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K
pt016251_POPTR_    M P I R G V - - E E I P K P P V V N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K
pt033007_POPTR_    V T V R G M A D H E L P R P P V I H R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K
pt040476_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - R H R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K
pt010908_POPTR_    V P V R G M A D H E L P R P P V I N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K
 
AT2G45190.1     N W A H F P H I H F G L V P D N Q P V K K T N M P Q Q E G E D N M V M K E G F Y A P A A A N V G V - T P Y
pt016251_POPTR_    N W A H F P H I H F G L M P D - Q P V K K T N V R Q Q E G E D - V L M K D G F F A P - - A N V G V - T P Y
pt033007_POPTR_    N W A H F P H I H F G L M P D - Q A M K K N N V R Q Q E G E D - V L I N D G F F A S - - S N V G V T T P Y
pt040476_POPTR_    N W A H F P H I H F G L M P D - Q P V K K A N V R Q Q E G E D - V L M T D E F F A A - - A N V G V - T P Y
pt010908_POPTR_    N W A H F P H I H F G L M P D - Q M V K K T N V R Q Q E G E D - V L M K D G F F S S - - A N A G V P T P Y
 
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