fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45190.1 LPASNQLQLQLGPHSY at 74/229 in AT2G45190.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016250 not found in 212aa AT2G45190.1 1st_1st 0.632054176 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45190.1     MSMSSMSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNL
pt016250_POPTR_ -----MAS-SSAAFSPDHLSSSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCTNL
                     *:* ***. ****:*.**:****:****:*:***.** :*********** ****

AT2G45190.1     LSVNMRSYVLPASNQLQLQLGPHSYFNPQ-DILEELRD--APSNMNMMMMNQHPTMNDIP
pt016250_POPTR_ FSVNMRS-LLPAANQFYLG---HGFFNPQINILEGMRSTGAPPS---LMINQ-PNPNE--
                :****** :***:**: *    *.:**** :*** :*.  **..   :*:** *. *:  

AT2G45190.1     SFMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAK
pt016250_POPTR_ SVMPIRGVEEIPKPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAK
                *.* ::  .****.* ********************:***********************

AT2G45190.1     NWAHFPHIHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFYAPAAANVGVTPY
pt016250_POPTR_ NWAHFPHIHFGLMPD-QPVKKTNVRQQEGED-VLMKDGFFAP--ANVGVTPY
                ************:** *******: ****** ::**:**:**  ********
BoxShade v3.31 C (beta, 970507) Output
AT2G45190.1     M S M S S M S S P S S A V C S P D H F S P S D H L C Y V Q C N F C Q T I L A V N V P Y T S L F K T V T V R C G C C T N L
pt016250_POPTR_    - - - - - M A S - S S A A F S P D H L S S S D Q L C Y V H C N F C D T V L A V S V P C S S L F K T V T V R C G H C T N L
 
AT2G45190.1     L S V N M R S Y V L P A S N Q L Q L Q L G P H S Y F N P Q - D I L E E L R D - - A P S N M N M M M M N Q H P T M N D I P
pt016250_POPTR_    F S V N M R S - L L P A A N Q F Y L G - - - H G F F N P Q I N I L E G M R S T G A P P S - - - L M I N Q - P N P N E - -
 
AT2G45190.1     S F M D L H Q Q H E I P K A P P V N R P P E K R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K
pt016250_POPTR_    S V M P I R G V E E I P K P P V V N R P P E K R Q R V P S A Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K
 
AT2G45190.1     N W A H F P H I H F G L V P D N Q P V K K T N M P Q Q E G E D N M V M K E G F Y A P A A A N V G V T P Y
pt016250_POPTR_    N W A H F P H I H F G L M P D - Q P V K K T N V R Q Q E G E D - V L M K D G F F A P - - A N V G V T P Y
 
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