fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45190.1 LPASNQLQLQLGPHSY at 74/229 in AT2G45190.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os036589 not found in 313aa AT4G00180.1 not_not 0.453724604 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45190.1     MSMSSMSSPSSAVCSPDHFSPS-------------------------------------D
Os036589_Os10t0 MSSSSSSSASSAAAAA--FRPAVVQREQQVVEEKFPAAAAAMREMVLPPVAAAAADSEQE
                ** ** **.***..:.  * *:                                     :

AT2G45190.1     HLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQL-------
Os036589_Os10t0 QLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLPTTAAAAPPPPPP
                :****:*::*:*:*.*.** :***:******* *:.**:****. :**::          

AT2G45190.1     --------------QLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDL
Os036589_Os10t0 PPPPPPPPAAHFPHSLNLAPANPPHHHSLLDEISTANSP-TQLLLEQHGLGGLMASAASC
                              .*:*.* .  : :.:*:*:  * *  . ::::**   . :.*  . 

AT2G45190.1     HQQHE--IPKAPP---------------------VNRPPEKRQRVPSAYNRFIKEEIQRI
Os036589_Os10t0 RNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFIKDEIQRI
                ::::.   . ***                     :*******************:*****

AT2G45190.1     KAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTN-MPQQEGEDNMVMKEGFY-
Os036589_Os10t0 KAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLLPQDHQRKDGLLKEGLYA
                ******************************:**:* :***. :**:. ..: ::***:* 

AT2G45190.1     ----APAAANVGVTPY
Os036589_Os10t0 AAAAAAAAANMGVAPY
                    *.****:**:**
BoxShade v3.31 C (beta, 970507) Output
AT2G45190.1     M S M S S M S S P S S A V C S P D H F S P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D
Os036589_Os10t0    M S S S S S S S A S S A A A A A - - F R P A V V Q R E Q Q V V E E K F P A A A A A M R E M V L P P V A A A A A D S E Q E
 
AT2G45190.1     H L C Y V Q C N F C Q T I L A V N V P Y T S L F K T V T V R C G C C T N L L S V N M R S Y V L P A S N Q L - - - - - - -
Os036589_Os10t0    Q L C Y V H C H Y C D T V L V V S V P S S S L F E T V T V R C G H C S S L L T V N M R G L L L P T T A A A A P P P P P P
 
AT2G45190.1     - - - - - - - - - - - - - - Q L Q L G P H S Y F N P Q D I L E E L R D A P S N M N M M M M N Q H P T M N D I P S F M D L
Os036589_Os10t0    P P P P P P P P A A H F P H S L N L A P A N P P H H H S L L D E I S T A N S P - T Q L L L E Q H G L G G L M A S A A S C
 
AT2G45190.1     H Q Q H E - - I P K A P P - - - - - - - - - - - - - - - - - - - - - V N R P P E K R Q R V P S A Y N R F I K E E I Q R I
Os036589_Os10t0    R N N N S P A A A A A P P P P T S Q G K A A A K E P S P R T N T A V I N R P P E K R Q R V P S A Y N R F I K D E I Q R I
 
AT2G45190.1     K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L V P D N Q P V K K T N - M P Q Q E G E D N M V M K E G F Y -
Os036589_Os10t0    K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D H Q G L K K T S L L P Q D H Q R K D G L L K E G L Y A
 
AT2G45190.1     - - - - A P A A A N V G V T P Y
Os036589_Os10t0    A A A A A A A A A N M G V A P Y
 
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