fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45190.1 LPASNQLQLQLGPHSY at 74/229 in AT2G45190.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008985 not found in 256aa AT2G45190.1 1st_1st 0.505643340 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45190.1     MSMSSMSSPSSAVCSPDHF---SPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCC
Os008985_Os02t0 --MSS-SSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHC
                  *** **.**** . **:   **:::****:** *:*****.** :*********** *

AT2G45190.1     TNLLSVNMRSYVLPA-----SNQLQLQLGPH--SYFNPQDILEELR-DAPSNMNMMMMNQ
Os008985_Os02t0 ANLLSVNLRGLLLPAPAPAPAN--QLHFGPSLLSPTSPHGLLDEVAFQTPS----LLMEQ
                :******:*. :***     :*  **::**   *  .*:.:*:*:  ::**    ::*:*

AT2G45190.1     --------------------HPTMNDIPSFMDLHQQHEIPKAPP--VNRPPEKRQRVPSA
Os008985_Os02t0 AASASLSSITGRSSSSCASNAPAMQ-MPPAKPVQQEPELPKNAPASANRPPEKRQRVPSA
                                     *:*: :*.   ::*: *:** .*  .*************

AT2G45190.1     YNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQEGE
Os008985_Os02t0 YNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPD-QGFKKTFKP-QDGS
                ******:***********************************:** * .***  * *:*.

AT2G45190.1     DNMVMKEGFY------APAAANVGVTPY
Os008985_Os02t0 EDILLKDSLYAAAAAAAAAAANMGVTPF
                :::::*:.:*      *.****:****:
BoxShade v3.31 C (beta, 970507) Output
AT2G45190.1     M S M S S M S S P S S A V C S P D H F - - - S P S D H L C Y V Q C N F C Q T I L A V N V P Y T S L F K T V T V R C G C C
Os008985_Os02t0    - - M S S - S S S S S A V F P L D H L A A P S P T E Q L C Y V H C N C C D T I L A V G V P C S S L F K T V T V R C G H C
 
AT2G45190.1     T N L L S V N M R S Y V L P A - - - - - S N Q L Q L Q L G P H - - S Y F N P Q D I L E E L R - D A P S N M N M M M M N Q
Os008985_Os02t0    A N L L S V N L R G L L L P A P A P A P A N - - Q L H F G P S L L S P T S P H G L L D E V A F Q T P S - - - - L L M E Q
 
AT2G45190.1     - - - - - - - - - - - - - - - - - - - - H P T M N D I P S F M D L H Q Q H E I P K A P P - - V N R P P E K R Q R V P S A
Os008985_Os02t0    A A S A S L S S I T G R S S S S C A S N A P A M Q - M P P A K P V Q Q E P E L P K N A P A S A N R P P E K R Q R V P S A
 
AT2G45190.1     Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L V P D N Q P V K K T N M P Q Q E G E
Os008985_Os02t0    Y N R F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D - Q G F K K T F K P - Q D G S
 
AT2G45190.1     D N M V M K E G F Y - - - - - - A P A A A N V G V T P Y
Os008985_Os02t0    E D I L L K D S L Y A A A A A A A A A A A N M G V T P F
 
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