fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45190.1 LPASNQLQLQLGPHSY at 74/229 in AT2G45190.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027997 not found in 453aa AT4G00180.1 1st_not 0.512415349 II
Sb000956 not found in 320aa AT2G45190.1 not_1st 0.426636568 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45190.1     -------------------------------------------------MSMSSMSSPSS
Sb000956_Sorbi1 ---------------------------------------------------MSSSSSSSS
Sb027997_Sorbi1 PDRARRRVLDDDSSLHRSSDRSIFSTASAPQVDQVVVGASCYISVLLGDRIMMSSSSSSS
                                                                   * * **.**

AT2G45190.1     AVCSPDHF--SP------------------------------SDHLCYVQCNFCQTILAV
Sb000956_Sorbi1 AASAATVFPPSPQLPPSPLLVENLPPLHQLTPVAAAEAAAPASEQLCYVHCHFCDTVLVV
Sb027997_Sorbi1 AAFPLDHLAPSP------------------------------TEQLCYVHCNCCDTILAV
                *. .   :  **                              :::****:*: *:*:*.*

AT2G45190.1     NVPYTSLFKTVTVRCGCCTNLLSVNMRSYVL-----------------------------
Sb000956_Sorbi1 SVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPTNTAAAAAPPAAVTASTTTTTTTTI
Sb027997_Sorbi1 GVPCSSLFKTVTVRCGHCANLLSVNLRGLLLP----------------------------
                .** :*********** *:.**:**:*. ::                             

AT2G45190.1     ----PASNQLQLQ---------LGPHSYFNPQD---ILEELR-DAPSNMNMMMMNQ----
Sb000956_Sorbi1 TTAPPPATSVNNGQFHFPQSVDLAP----NPHHQSLLLDEISSANPR---LQLLEQHGL-
Sb027997_Sorbi1 -PAAPPANHLNFGH------SLLSPTS---PHG---LLDELALQAPS----LLMEQASAN
                    *.:. ::           *.*     *:    :*:*:    *      :::*    

AT2G45190.1     --HPTMND---------------IPSFMDLHQQHEIPK--APPVNRPPEKRQRVPSAYNR
Sb000956_Sorbi1 --GGLIPSGRNAAA----PAPPPPPAAAGKGAKEPSPR-TNPVINRPPEKRQRVPSAYNR
Sb027997_Sorbi1 LSSSTMTGGSNSSCASNLPA-GPMPAAKPVQQEPELPKTTAPSVNRPPEKRQRVPSAYNR
                     : .                *:      :   *:   * :****************

AT2G45190.1     FIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQE-GEDN
Sb000956_Sorbi1 FIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLLPQDLQRKD
Sb027997_Sorbi1 FIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPD-QGLKKT-FKTQD-GAED
                ***:************:**********************:** * :*** :  *:   .:

AT2G45190.1     MVMKEGFY------APAAANVGVTPY
Sb000956_Sorbi1 GLLKEGLYAAAAAAAAAAANMGVAPY
Sb027997_Sorbi1 MLLKDGLYA--AAAAAAAANMGITPF
                 ::*:*:*      *.****:*::*:
BoxShade v3.31 C (beta, 970507) Output
AT2G45190.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S M S S M S S P S S
Sb000956_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S S S S S S S
Sb027997_Sorbi1    P D R A R R R V L D D D S S L H R S S D R S I F S T A S A P Q V D Q V V V G A S C Y I S V L L G D R I M M S S S S S S S
 
AT2G45190.1     A V C S P D H F - - S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S D H L C Y V Q C N F C Q T I L A V
Sb000956_Sorbi1    A A S A A T V F P P S P Q L P P S P L L V E N L P P L H Q L T P V A A A E A A A P A S E Q L C Y V H C H F C D T V L V V
Sb027997_Sorbi1    A A F P L D H L A P S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T E Q L C Y V H C N C C D T I L A V
 
AT2G45190.1     N V P Y T S L F K T V T V R C G C C T N L L S V N M R S Y V L - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb000956_Sorbi1    S V P T S S L F K T V T V R C G H C S S L L T V N M R G L L F P G T P T N T A A A A A P P A A V T A S T T T T T T T T I
Sb027997_Sorbi1    G V P C S S L F K T V T V R C G H C A N L L S V N L R G L L L P - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G45190.1     - - - - P A S N Q L Q L Q - - - - - - - - - L G P H S Y F N P Q D - - - I L E E L R - D A P S N M N M M M M N Q - - - -
Sb000956_Sorbi1    T T A P P P A T S V N N G Q F H F P Q S V D L A P - - - - N P H H Q S L L L D E I S S A N P R - - - L Q L L E Q H G L -
Sb027997_Sorbi1    - P A A P P A N H L N F G H - - - - - - S L L S P T S - - - P H G - - - L L D E L A L Q A P S - - - - L L M E Q A S A N
 
AT2G45190.1     - - H P T M N D - - - - - - - - - - - - - - - I P S F M D L H Q Q H E I P K - - A P P V N R P P E K R Q R V P S A Y N R
Sb000956_Sorbi1    - - G G L I P S G R N A A A - - - - P A P P P P P A A A G K G A K E P S P R - T N P V I N R P P E K R Q R V P S A Y N R
Sb027997_Sorbi1    L S S S T M T G G S N S S C A S N L P A - G P M P A A K P V Q Q E P E L P K T T A P S V N R P P E K R Q R V P S A Y N R
 
AT2G45190.1     F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L V P D N Q P V K K T N M P Q Q E - G E D N
Sb000956_Sorbi1    F I K D E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H I H F G L M P D H Q G L K K T S L L P Q D L Q R K D
Sb027997_Sorbi1    F I K D E I Q R I K A G N P D I T H R E A F S A A A K N W A H F P H I H F G L M P D - Q G L K K T - F K T Q D - G A E D
 
AT2G45190.1     M V M K E G F Y - - - - - - A P A A A N V G V T P Y
Sb000956_Sorbi1    G L L K E G L Y A A A A A A A A A A A N M G V A P Y
Sb027997_Sorbi1    M L L K D G L Y A - - A A A A A A A A N M G I T P F
 
0