fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45190.1 LPASNQLQLQLGPHSY at 74/229 in AT2G45190.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029682 not found in 431aa AT4G00180.1 not_not 0.440180586 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45190.1     -----MSMSSMSSPSSAVCS-PDHF----------------SPSDHLCYVQCNFCQTILA
Sb029682_Sorbi1 AAQARRSTGSFASFGAMMSSVPETFNLDQQHLVVQQQQPPPAEQEQICYVHCSYCDTILA
                      * .*::* .: :.* *: *                : .:::***:*.:*:****

AT2G45190.1     VNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLP-ASNQL-----QLQLGP----------
Sb029682_Sorbi1 VGVPCSSLFQTVTVRCGHCSNLLYVNLRALLLPAAANQLPPFGGQALLSPTSPHGLLDAE
                *.** :***:******* *:*** **:*: :** *:***     *  *.*          

AT2G45190.1     -HSYFNPQDILEELRDAPS----------------NMNMMMMNQHPTMNDIPSFMDLHQQ
Sb029682_Sorbi1 TMSSFQAPRSLQPSTDPPSACVSTITSINNTCGGGNSASAMSSMAPPPPAKPALL----E
                  * *:.   *:   *.**                *    * .  *.    *:::    :

AT2G45190.1     HEIPK-APPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPH
Sb029682_Sorbi1 PQLPKSAASGNKTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPH
                 ::** *.. *:..***************:*******.****:*****************

AT2G45190.1     IHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFYAPAAA------------NVGVTPY
Sb029682_Sorbi1 IHFGLMPD-QGLKKNPMQNQEGAECMLFKDGLYAAAAAAAAAAAAATAASGMGISPF
                *****:** * :**. * :*** : *::*:*:**.***            .:*::*:
BoxShade v3.31 C (beta, 970507) Output
AT2G45190.1     - - - - - M S M S S M S S P S S A V C S - P D H F - - - - - - - - - - - - - - - - S P S D H L C Y V Q C N F C Q T I L A
Sb029682_Sorbi1    A A Q A R R S T G S F A S F G A M M S S V P E T F N L D Q Q H L V V Q Q Q Q P P P A E Q E Q I C Y V H C S Y C D T I L A
 
AT2G45190.1     V N V P Y T S L F K T V T V R C G C C T N L L S V N M R S Y V L P - A S N Q L - - - - - Q L Q L G P - - - - - - - - - -
Sb029682_Sorbi1    V G V P C S S L F Q T V T V R C G H C S N L L Y V N L R A L L L P A A A N Q L P P F G G Q A L L S P T S P H G L L D A E
 
AT2G45190.1     - H S Y F N P Q D I L E E L R D A P S - - - - - - - - - - - - - - - - N M N M M M M N Q H P T M N D I P S F M D L H Q Q
Sb029682_Sorbi1    T M S S F Q A P R S L Q P S T D P P S A C V S T I T S I N N T C G G G N S A S A M S S M A P P P P A K P A L L - - - - E
 
AT2G45190.1     H E I P K - A P P V N R P P E K R Q R V P S A Y N R F I K E E I Q R I K A G N P D I S H R E A F S A A A K N W A H F P H
Sb029682_Sorbi1    P Q L P K S A A S G N K T S E K R Q R V P S A Y N R F I K D E I Q R I K A S N P D I T H R E A F S A A A K N W A H F P H
 
AT2G45190.1     I H F G L V P D N Q P V K K T N M P Q Q E G E D N M V M K E G F Y A P A A A - - - - - - - - - - - - N V G V T P Y
Sb029682_Sorbi1    I H F G L M P D - Q G L K K N P M Q N Q E G A E C M L F K D G L Y A A A A A A A A A A A A A T A A S G M G I S P F
 
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