fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038703 not found in 244aa AT2G45420.1 not_1st 0.604113110 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45420.1     MSGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDS
pt038703_POPTR_ MSTTTTNPINSGVGGGSSGGGGA---GGSS-GGGGGPCGACKFLRRKCVPGCIFAPYFDS
                **   ..    * ***..****:   **** *****************************

AT2G45420.1     EQGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFAL
pt038703_POPTR_ EQGAAHFAAVHKVFGASNVSKLLLHIPAHKRPDAVVTICYEAQARLRDPVYGCVAHIFAL
                ***:*:*********************.*:*.*************:***:**********

AT2G45420.1     QQQVVNLQAEVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLP
pt038703_POPTR_ QQQVVNLQAELSYLQAHLAAMEVPSP-------PPPPPPALVTSPPFSIADLPSASSIPG
                **********:********::*:*.*       * * *  :...**::*:***:: *   

AT2G45420.1     STYDLASIFDQTTSSSAWATQQRRFIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAHEL
pt038703_POPTR_ AAYDLSSLFDPMVQPS-WSMQPRQ-LDP-HQFGGSSGTSETSGG-------DLQALAREL
                ::***:*:**  ...* *: * *: :** **:* **.:*..: *       ******:**

AT2G45420.1     LHRQGSPPPAA---TDHSPSRTMSR
pt038703_POPTR_ LHRRGSLPPGSVPCSDALASSSISK
                ***:** **.:   :*  .* ::*:
BoxShade v3.31 C (beta, 970507) Output
AT2G45420.1     M S G G G N T I T A V G G G G G G C G G G G S S G G G G S S G G G G G G P C G A C K F L R R K C V P G C I F A P Y F D S
pt038703_POPTR_    M S T T T T N P I N S G V G G G S S G G G G A - - - G G S S - G G G G G P C G A C K F L R R K C V P G C I F A P Y F D S
 
AT2G45420.1     E Q G S A Y F A A V H K V F G A S N V S K L L L H I P V H R R S D A V V T I C Y E A Q A R I R D P I Y G C V A H I F A L
pt038703_POPTR_    E Q G A A H F A A V H K V F G A S N V S K L L L H I P A H K R P D A V V T I C Y E A Q A R L R D P V Y G C V A H I F A L
 
AT2G45420.1     Q Q Q V V N L Q A E V S Y L Q A H L A S L E L P Q P Q T R P Q P M P Q P Q P L F F T P P P P L A I T D L P A S V S P L P
pt038703_POPTR_    Q Q Q V V N L Q A E L S Y L Q A H L A A M E V P S P - - - - - - - P P P P P P A L V T S P P F S I A D L P S A S S I P G
 
AT2G45420.1     S T Y D L A S I F D Q T T S S S A W A T Q Q R R F I D P R H Q Y G V S S S S S S V A V G L G G E N S H D L Q A L A H E L
pt038703_POPTR_    A A Y D L S S L F D P M V Q P S - W S M Q P R Q - L D P - H Q F G G S S G T S E T S G G - - - - - - - D L Q A L A R E L
 
AT2G45420.1     L H R Q G S P P P A A - - - T D H S P S R T M S R
pt038703_POPTR_    L H R R G S L P P G S V P C S D A L A S S S I S K
 
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