fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016475 not found in 246aa AT2G45420.1 1st_1st 0.611825192 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45420.1     MSGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDS
pt016475_POPTR_ MSTATTNPINTGAGGGSSGGG---GGGGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDS
                ** . ..   .*.***..***   ****..******************************

AT2G45420.1     EQGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFAL
pt016475_POPTR_ EQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFAL
                ***:*:***********************:* *************:***:**********

AT2G45420.1     QQQVVNLQAEVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLP
pt016475_POPTR_ QQQVVNLQAELSYLQAHLAALEVPSP-------PPPPPPTLVTPPPLSIADLP-SASSIP
                **********:********:**:*.*       * * *  :..****:*:*** *.*.:*

AT2G45420.1     STYDLASIFDQTTSSSAWATQQ-RRFIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAHE
pt016475_POPTR_ AAYDLSCLFDPMMQPS-WSNMQPQRQMDIR-QFGGSGGSS----GTGG---GDLQALARE
                ::***:.:**   ..* *:. * :* :* * *:* *..**    * **    ******:*

AT2G45420.1     LLHRQGSPPP---AATDHSPSRTMSR
pt016475_POPTR_ LLHRRGSPPPGFMSCSDTLASPSISK
                ****:*****   :.:*  .* ::*:
BoxShade v3.31 C (beta, 970507) Output
AT2G45420.1     M S G G G N T I T A V G G G G G G C G G G G S S G G G G S S G G G G G G P C G A C K F L R R K C V P G C I F A P Y F D S
pt016475_POPTR_    M S T A T T N P I N T G A G G G S S G G G - - - G G G G G G G G G G G G P C G A C K F L R R K C V P G C I F A P Y F D S
 
AT2G45420.1     E Q G S A Y F A A V H K V F G A S N V S K L L L H I P V H R R S D A V V T I C Y E A Q A R I R D P I Y G C V A H I F A L
pt016475_POPTR_    E Q G A A H F A A V H K V F G A S N V S K L L L H I P V H K R L D A V V T I C Y E A Q A R L R D P V Y G C V A H I F A L
 
AT2G45420.1     Q Q Q V V N L Q A E V S Y L Q A H L A S L E L P Q P Q T R P Q P M P Q P Q P L F F T P P P P L A I T D L P A S V S P L P
pt016475_POPTR_    Q Q Q V V N L Q A E L S Y L Q A H L A A L E V P S P - - - - - - - P P P P P P T L V T P P P L S I A D L P - S A S S I P
 
AT2G45420.1     S T Y D L A S I F D Q T T S S S A W A T Q Q - R R F I D P R H Q Y G V S S S S S S V A V G L G G E N S H D L Q A L A H E
pt016475_POPTR_    A A Y D L S C L F D P M M Q P S - W S N M Q P Q R Q M D I R - Q F G G S G G S S - - - - G T G G - - - G D L Q A L A R E
 
AT2G45420.1     L L H R Q G S P P P - - - A A T D H S P S R T M S R
pt016475_POPTR_    L L H R R G S P P P G F M S C S D T L A S P S I S K
 
0