fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb002297 not found in 276aa AT2G45420.1 1st_1st 0.542416452 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45420.1     MSGGGNTITAVGGG--GGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYF
Sb002297_Sorbi1 MSAGGGTSTLGGGGPSGSGASGGPGPGGSGGGGGGGGGPCGACKFLRRKCVSGCIFAPYF
                **.**.* *  ***  *.*..** ..**.*..*******************.********

AT2G45420.1     DSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIF
Sb002297_Sorbi1 DSEQGAAHFAAVHKVFGASNVSKLLLQIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIF
                *****:*:******************:**.*:* *************:***:********

AT2G45420.1     ALQQQVVNLQAEVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSP
Sb002297_Sorbi1 ALQQQVVNLQAELTYLQAHLATLELPSPP--PLPAPPQMPL----PGAFSISDLPSSTS-
                ************::*******:****.*   * * *   **    * .::*:***:*.* 

AT2G45420.1     LPSTYDLASIFDQTTSSSAWATQQRRFIDPRHQY--------------------------
Sb002297_Sorbi1 VPTTVDLSALFDPPPQQPQWAVQAAQ---PHHHHHHHQQPQQQQHHQLRQPAPYGAPVRP
                :*:* **:::** ..... **.*  :   *:*::                          

AT2G45420.1     -----GVSSSSSSVAVGLGGENSHDLQALAHELL--HRQG-----SPPPAATDHSPSRTM
Sb002297_Sorbi1 GGGGPGMAESS-----GGGGD---DLQSLARELLDRHRSGGVKLEQPPPPP--HSR----
                     *::.**     * **:   ***:**:***  **.*     .***..  **     

AT2G45420.1     SR
Sb002297_Sorbi1 --
BoxShade v3.31 C (beta, 970507) Output
AT2G45420.1     M S G G G N T I T A V G G G - - G G G C G G G G S S G G G G S S G G G G G G P C G A C K F L R R K C V P G C I F A P Y F
Sb002297_Sorbi1    M S A G G G T S T L G G G G P S G S G A S G G P G P G G S G G G G G G G G G P C G A C K F L R R K C V S G C I F A P Y F
 
AT2G45420.1     D S E Q G S A Y F A A V H K V F G A S N V S K L L L H I P V H R R S D A V V T I C Y E A Q A R I R D P I Y G C V A H I F
Sb002297_Sorbi1    D S E Q G A A H F A A V H K V F G A S N V S K L L L Q I P A H K R L D A V V T I C Y E A Q A R L R D P V Y G C V A H I F
 
AT2G45420.1     A L Q Q Q V V N L Q A E V S Y L Q A H L A S L E L P Q P Q T R P Q P M P Q P Q P L F F T P P P P L A I T D L P A S V S P
Sb002297_Sorbi1    A L Q Q Q V V N L Q A E L T Y L Q A H L A T L E L P S P P - - P L P A P P Q M P L - - - - P G A F S I S D L P S S T S -
 
AT2G45420.1     L P S T Y D L A S I F D Q T T S S S A W A T Q Q R R F I D P R H Q Y - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb002297_Sorbi1    V P T T V D L S A L F D P P P Q Q P Q W A V Q A A Q - - - P H H H H H H H Q Q P Q Q Q Q H H Q L R Q P A P Y G A P V R P
 
AT2G45420.1     - - - - - G V S S S S S S V A V G L G G E N S H D L Q A L A H E L L - - H R Q G - - - - - S P P P A A T D H S P S R T M
Sb002297_Sorbi1    G G G G P G M A E S S - - - - - G G G G D - - - D L Q S L A R E L L D R H R S G G V K L E Q P P P P P - - H S R - - - -
 
AT2G45420.1     S R
Sb002297_Sorbi1    - -
 
0