fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050045 not found in 234aa AT2G45420.1 not_1st 0.555269922 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45420.1     MSGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDS
gm050045_Glyma1 MSSGN-------------GGGGSSSGTGS-------PCGACKFLRRKCVSGCIFAPYFDS
                **.*.             ******.* **       *************.**********

AT2G45420.1     EQGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFAL
gm050045_Glyma1 EQGTSHFAAVHKVFGASNVSKLLLSIPVHRRLDTVITICYEAQSRIRDPVYGCVAHIFAL
                ***:::****************** ****** *:*:*******:*****:**********

AT2G45420.1     QQQVVNLQAEVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDL-PASVSPL
gm050045_Glyma1 QQQLVSLQAELSYLHGHLAQMELPQP-SPPPPPPQTTA---APPSGFSIADLPPATVAAV
                ***:*.****:***:.***.:***** : * * **. .   :**. ::*:** **:*:.:

AT2G45420.1     P-STYDLASIFDQTTSSSAWATQQRRFIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAH
gm050045_Glyma1 PATTYDLSSLFDPLGQTS-WAMQQRA-IDLR-QYLAAAAAPSTTSGA------DIQAVAR
                * :****:*:**   .:* ** ***  ** * ** .::::.*.: *       *:**:*:

AT2G45420.1     ELLHRQGSP--PPAATDH-SPSRTMSR
gm050045_Glyma1 DIPHRHGSPPSPPASSSNASPSLSHSK
                :: **:***  ***::.: *** : *:
BoxShade v3.31 C (beta, 970507) Output
AT2G45420.1     M S G G G N T I T A V G G G G G G C G G G G S S G G G G S S G G G G G G P C G A C K F L R R K C V P G C I F A P Y F D S
gm050045_Glyma1    M S S G N - - - - - - - - - - - - - G G G G S S S G T G S - - - - - - - P C G A C K F L R R K C V S G C I F A P Y F D S
 
AT2G45420.1     E Q G S A Y F A A V H K V F G A S N V S K L L L H I P V H R R S D A V V T I C Y E A Q A R I R D P I Y G C V A H I F A L
gm050045_Glyma1    E Q G T S H F A A V H K V F G A S N V S K L L L S I P V H R R L D T V I T I C Y E A Q S R I R D P V Y G C V A H I F A L
 
AT2G45420.1     Q Q Q V V N L Q A E V S Y L Q A H L A S L E L P Q P Q T R P Q P M P Q P Q P L F F T P P P P L A I T D L - P A S V S P L
gm050045_Glyma1    Q Q Q L V S L Q A E L S Y L H G H L A Q M E L P Q P - S P P P P P P Q T T A - - - A P P S G F S I A D L P P A T V A A V
 
AT2G45420.1     P - S T Y D L A S I F D Q T T S S S A W A T Q Q R R F I D P R H Q Y G V S S S S S S V A V G L G G E N S H D L Q A L A H
gm050045_Glyma1    P A T T Y D L S S L F D P L G Q T S - W A M Q Q R A - I D L R - Q Y L A A A A A P S T T S G A - - - - - - D I Q A V A R
 
AT2G45420.1     E L L H R Q G S P - - P P A A T D H - S P S R T M S R
gm050045_Glyma1    D I P H R H G S P P S P P A S S S N A S P S L S H S K
 
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