fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45430.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039340 not found in 298aa AT4G22810.1 1st_not 0.566893424 II
Pt017143 not found in 300aa AT2G45430.1 not_1st 0.553287981 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45430.1     MDQVS---RSLPPPFLSRDLHLHPHHQFQHQQQQQ---QQNHGHDIDQHRIGGLKRDRDA
pt017143_POPTR_ MDPVSAHGRPLPPPFHTRDFHL---HQFQHHQQQNSEDEQSGNGDLNR----GQKREHD-
pt039340_POPTR_ MDPVAAHGRPLPPPFHTRDFHL---HQFQHQQQQNSEDEQSGNGNLNR----GQKREHA-
                ** *:   *.***** :**:**   *****:***:   :*. . ::::    * **::  

AT2G45430.1     DIDPNEHSSAGKDQSTPGSGGESGGGGGGDNHITRRPRGRPAGSKNKPKPPIIITRDSAN
pt017143_POPTR_ EI-NNNNNTVEGLELVPSS-------SGGEGEISRRPRGRPAGSKNKPKPPIIITRDSAN
pt039340_POPTR_ EIATNNNNTAEGKELVPSS-------AGGEGEITRRPRGRPAGSKNKPKPPIIITRDSPN
                :*  *::.:.   : .*.*       .**:..*:************************.*

AT2G45430.1     ALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNL
pt017143_POPTR_ ALRSHVMEIATGSDIMESVSTFARRRQRGVCILSGTGTVTNVTLKQPAS-PG---AVVTL
pt039340_POPTR_ ALRSHVMEIATGCDIMESVSTFARRRQRGVCILSATGTVTNVTLKQPAS-PG---AVVTL
                **:*****:*.*.*:****:.********:*:**..*:*****::**** **   :**.*

AT2G45430.1     HGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLMASGPVVIMAASFGN
pt017143_POPTR_ HGRFEILSLSGSFLPPPAPPAASGLTVYLAGGQGQVIGGSVAGPLLASGPVVVMAASFGN
pt039340_POPTR_ HGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGN
                **************************:*********:****.***:******:*******

AT2G45430.1     AAYERLPLEEDDQEEQTAGAVANNIDGNATMG--GGTQTQTQTQQQQQQQLMQDP-TSFI
pt017143_POPTR_ AAYERLPLEED-IESQTP------MLGSGPLGSPGINNIGQQQQNQQQQQLMQDPKTSLF
pt039340_POPTR_ AAYERLPLEED--ESQTP------VPGTGPLGSPGVSSIG--QQNQQQHQLMQDPNTSLF
                ***********  *.**.      : *...:*  * ..     *:***:****** **::

AT2G45430.1     QGLPPNLMNSVQLPAEAYWGT-PRPSF
pt017143_POPTR_ QGLPQNLLNSVQLPAEAYWGTGGRPPY
pt039340_POPTR_ QGLPQNLLNSVQLPSEAYWGTGGRPPY
                **** **:******:******  **.:
BoxShade v3.31 C (beta, 970507) Output
AT2G45430.1     M D Q V S - - - R S L P P P F L S R D L H L H P H H Q F Q H Q Q Q Q Q - - - Q Q N H G H D I D Q H R I G G L K R D R D A
pt017143_POPTR_    M D P V S A H G R P L P P P F H T R D F H L - - - H Q F Q H H Q Q Q N S E D E Q S G N G D L N R - - - - G Q K R E H D -
pt039340_POPTR_    M D P V A A H G R P L P P P F H T R D F H L - - - H Q F Q H Q Q Q Q N S E D E Q S G N G N L N R - - - - G Q K R E H A -
 
AT2G45430.1     D I D P N E H S S A G K D Q S T P G S G G E S G G G G G G D N H I T R R P R G R P A G S K N K P K P P I I I T R D S A N
pt017143_POPTR_    E I - N N N N N T V E G L E L V P S S - - - - - - - S G G E G E I S R R P R G R P A G S K N K P K P P I I I T R D S A N
pt039340_POPTR_    E I A T N N N N T A E G K E L V P S S - - - - - - - A G G E G E I T R R P R G R P A G S K N K P K P P I I I T R D S P N
 
AT2G45430.1     A L K S H V M E V A N G C D V M E S V T V F A R R R Q R G I C V L S G N G A V T N V T I R Q P A S V P G G G S S V V N L
pt017143_POPTR_    A L R S H V M E I A T G S D I M E S V S T F A R R R Q R G V C I L S G T G T V T N V T L K Q P A S - P G - - - A V V T L
pt039340_POPTR_    A L R S H V M E I A T G C D I M E S V S T F A R R R Q R G V C I L S A T G T V T N V T L K Q P A S - P G - - - A V V T L
 
AT2G45430.1     H G R F E I L S L S G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V G G S V V G P L M A S G P V V I M A A S F G N
pt017143_POPTR_    H G R F E I L S L S G S F L P P P A P P A A S G L T V Y L A G G Q G Q V I G G S V A G P L L A S G P V V V M A A S F G N
pt039340_POPTR_    H G R F E I L S L S G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V G G S V V G P L L A S G P V V I M A A S F G N
 
AT2G45430.1     A A Y E R L P L E E D D Q E E Q T A G A V A N N I D G N A T M G - - G G T Q T Q T Q T Q Q Q Q Q Q Q L M Q D P - T S F I
pt017143_POPTR_    A A Y E R L P L E E D - I E S Q T P - - - - - - M L G S G P L G S P G I N N I G Q Q Q Q N Q Q Q Q Q L M Q D P K T S L F
pt039340_POPTR_    A A Y E R L P L E E D - - E S Q T P - - - - - - V P G T G P L G S P G V S S I G - - Q Q N Q Q Q H Q L M Q D P N T S L F
 
AT2G45430.1     Q G L P P N L M N S V Q L P A E A Y W G T - P R P S F
pt017143_POPTR_    Q G L P Q N L L N S V Q L P A E A Y W G T G G R P P Y
pt039340_POPTR_    Q G L P Q N L L N S V Q L P S E A Y W G T G G R P P Y
 
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