fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45430.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029863 not found in 559aa AT4G17800.1 not_not 0.414965986 III
Sb033333 not found in 547aa AT4G22810.1 not_not 0.401360544 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45430.1     ------MDQVSRSL------------------------------------PPPFLS----
Sb033333_Sorbi1 PAAPSSIGTNARSLARPCARPRTRVAGRATMDPAVAAAAAHGGGHHFAQPVAPFHHPFGG
Sb029863_Sorbi1 ----------QKSMA----------------------------GLDLGTAATRYVH----
                           :*:                                     . :      

AT2G45430.1     ---RDLHLHPHHQ---FQHQQQQQQQNH--------GHDIDQHRIGGLKRDRDADIDPNE
Sb033333_Sorbi1 LGGHHHHLFPGQQHPAFQHFQEQQRQLELLGAGGGVPGGVNKQELGVGGDDSNNTIN---
Sb029863_Sorbi1 ---QLHHLHPDLQ---LQHSYAKQPEP----------SEDDPHGSGGGGGNSNNGGPYGE
                   :  **.*  *   :**   :* :              : :  *    : :       

AT2G45430.1     HSSAGKDQSTPGS---GGESGGGGGGDNH------ITRRPRGRPAGSKNKPKPPIIITRD
Sb033333_Sorbi1 --SAGSNGSGDGAVAGADQQAGGGDGDQQQQQHALVMRRPRGRPAGSKNKPKPPVIITRD
Sb029863_Sorbi1 H-DGGSSSSGPGA---GDAPGGSGGNGEM------VARRPRGRPPGSKNKPKPPVIITRE
                  ..*.. *  *:   ..  .*.*...:       : *******.*********:****:

AT2G45430.1     SANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSV
Sb033333_Sorbi1 SASALRAHVLEVAAGCDVVDSIAGFARRRQVGVCVLSASGSVANVCIRHSGAAPG---AV
Sb029863_Sorbi1 SANTLRAHILEVGSGCDVFESVSTYARRRQRGVCVLSGSGVVTNVTLRQP-SAPTG--AV
                **.:*::*::**. ****.:*:: :***** *:****..* *:** :*:. :.*    :*

AT2G45430.1     VNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLMASGPVVIMAAS
Sb033333_Sorbi1 VTMAGCFDILSLSGSFLPPPAPPAATGLTVYLSGGQGQVVGGTVAGPLLASGPVVIVAAC
Sb029863_Sorbi1 VTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALYAAGPVIVIAAS
                *.: * *:***************.*:.**::*:*********.*.*.* *:***:::**.

AT2G45430.1     FGNAAYERLPLEEDDQEEQTAG----AVANNIDG-NATMGGGTQTQTQTQQQQQQQLMQD
Sb033333_Sorbi1 FGNAAYERLPLDDDEPPQQQLLQQALPPPQGMAGASSS------------------SPPP
Sb029863_Sorbi1 FANVAYERLPLEEEEAQAAPPGLQMQPPGGGVDGAGGGMGGGP-------------FPPD
                *.*.*******::::           .   .: * ..                       

AT2G45430.1     PTSF------IQGLP-PNL-MNSV-----QLPAEA---YWGTPRPSF-------
Sb033333_Sorbi1 PLSLPGQHPLADQLP-HSL-MNGL-----PLPADA--YAWANPGGSGAGRVAPY
Sb029863_Sorbi1 PSA--------AGLPFFNLPLNNMAGGGSQLPPGADGHGWAGARPPF-------
                * :          **  .* :*.:      **. *    *. .  .
BoxShade v3.31 C (beta, 970507) Output
AT2G45430.1     - - - - - - M D Q V S R S L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P P P F L S - - - -
Sb033333_Sorbi1    P A A P S S I G T N A R S L A R P C A R P R T R V A G R A T M D P A V A A A A A H G G G H H F A Q P V A P F H H P F G G
Sb029863_Sorbi1    - - - - - - - - - - Q K S M A - - - - - - - - - - - - - - - - - - - - - - - - - - - - G L D L G T A A T R Y V H - - - -
 
AT2G45430.1     - - - R D L H L H P H H Q - - - F Q H Q Q Q Q Q Q Q N H - - - - - - - - G H D I D Q H R I G G L K R D R D A D I D P N E
Sb033333_Sorbi1    L G G H H H H L F P G Q Q H P A F Q H F Q E Q Q R Q L E L L G A G G G V P G G V N K Q E L G V G G D D S N N T I N - - -
Sb029863_Sorbi1    - - - Q L H H L H P D L Q - - - L Q H S Y A K Q P E P - - - - - - - - - - S E D D P H G S G G G G G N S N N G G P Y G E
 
AT2G45430.1     H S S A G K D Q S T P G S - - - G G E S G G G G G G D N H - - - - - - I T R R P R G R P A G S K N K P K P P I I I T R D
Sb033333_Sorbi1    - - S A G S N G S G D G A V A G A D Q Q A G G G D G D Q Q Q Q Q H A L V M R R P R G R P A G S K N K P K P P V I I T R D
Sb029863_Sorbi1    H - D G G S S S S G P G A - - - G D A P G G S G G N G E M - - - - - - V A R R P R G R P P G S K N K P K P P V I I T R E
 
AT2G45430.1     S A N A L K S H V M E V A N G C D V M E S V T V F A R R R Q R G I C V L S G N G A V T N V T I R Q P A S V P G G G S S V
Sb033333_Sorbi1    S A S A L R A H V L E V A A G C D V V D S I A G F A R R R Q V G V C V L S A S G S V A N V C I R H S G A A P G - - - A V
Sb029863_Sorbi1    S A N T L R A H I L E V G S G C D V F E S V S T Y A R R R Q R G V C V L S G S G V V T N V T L R Q P - S A P T G - - A V
 
AT2G45430.1     V N L H G R F E I L S L S G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V G G S V V G P L M A S G P V V I M A A S
Sb033333_Sorbi1    V T M A G C F D I L S L S G S F L P P P A P P A A T G L T V Y L S G G Q G Q V V G G T V A G P L L A S G P V V I V A A C
Sb029863_Sorbi1    V T L H G R F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G N V V G A L Y A A G P V I V I A A S
 
AT2G45430.1     F G N A A Y E R L P L E E D D Q E E Q T A G - - - - A V A N N I D G - N A T M G G G T Q T Q T Q T Q Q Q Q Q Q Q L M Q D
Sb033333_Sorbi1    F G N A A Y E R L P L D D D E P P Q Q Q L L Q Q A L P P P Q G M A G A S S S - - - - - - - - - - - - - - - - - - S P P P
Sb029863_Sorbi1    F A N V A Y E R L P L E E E E A Q A A P P G L Q M Q P P G G G V D G A G G G M G G G P - - - - - - - - - - - - - F P P D
 
AT2G45430.1     P T S F - - - - - - I Q G L P - P N L - M N S V - - - - - Q L P A E A - - - Y W G T P R P S F - - - - - - -
Sb033333_Sorbi1    P L S L P G Q H P L A D Q L P - H S L - M N G L - - - - - P L P A D A - - Y A W A N P G G S G A G R V A P Y
Sb029863_Sorbi1    P S A - - - - - - - - A G L P F F N L P L N N M A G G G S Q L P P G A D G H G W A G A R P P F - - - - - - -
 
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