fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45430.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005962 not found in 310aa AT2G45430.1 not_1st 0.541950113 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45430.1     MDQVS---RSLPPPFLSRDLHLHPHHQFQ--HQQQQQQQNHGHDIDQHRIGGLKRDRDAD
gm005962_Glyma0 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQPHHNNQNTEDEAGNG------RGQKRDRD--
                ** *:   *.******:************  *::*: ::: *:.       * *****  

AT2G45430.1     IDPNEHSSAGKDQSTP----GSGGESGGGGGGDNHITRRPRGRPAGSKNKPKPPIIITRD
gm005962_Glyma0 ----ENVGGGGGATTPPHGGGEGKEPGSEDGGGSDMGRRPRGRPAGSKNKPKPPIIITRD
                    *: ..* . :**    *.* *.*. .**...: ***********************

AT2G45430.1     SANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSV
gm005962_Glyma0 SANALRSHVMEITNGCDIMESVTAFARRRQRGICLLSGSGTVTNVTLRQPAS-P---SAV
                *****:*****::****:*****.**********:***.*:*****:***** *   *:*

AT2G45430.1     VNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLMASGPVVIMAAS
gm005962_Glyma0 VTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLVASGPVVIMAAS
                *.**************************:*******************:***********

AT2G45430.1     FGNAAYERLPLEEDDQEEQTAGAVANNIDGNATMG-GGTQTQTQTQ-QQQQQQLMQDP--
gm005962_Glyma0 FGNAAYERLPLEEEETPVPYHGT-----EGLGSPGIPGTQQQSQSQPQQQQQQLVGDPNS
                *************::      *:     :* .: *  *** *:*:* *******: **  

AT2G45430.1     TSFIQGLPPNLMNSVQLPAEAYW-GTPRPSF
gm005962_Glyma0 SSLFHGVPQNLLNSIQLPAEGYWGGSARPPF
                :*:::*:* **:**:*****.** *:.**.*
BoxShade v3.31 C (beta, 970507) Output
AT2G45430.1     M D Q V S - - - R S L P P P F L S R D L H L H P H H Q F Q - - H Q Q Q Q Q Q Q N H G H D I D Q H R I G G L K R D R D A D
gm005962_Glyma0    M D P V A A Q G R P L P P P F L T R D L H L H P H H Q F Q P H H N N Q N T E D E A G N G - - - - - - R G Q K R D R D - -
 
AT2G45430.1     I D P N E H S S A G K D Q S T P - - - - G S G G E S G G G G G G D N H I T R R P R G R P A G S K N K P K P P I I I T R D
gm005962_Glyma0    - - - - E N V G G G G G A T T P P H G G G E G K E P G S E D G G G S D M G R R P R G R P A G S K N K P K P P I I I T R D
 
AT2G45430.1     S A N A L K S H V M E V A N G C D V M E S V T V F A R R R Q R G I C V L S G N G A V T N V T I R Q P A S V P G G G S S V
gm005962_Glyma0    S A N A L R S H V M E I T N G C D I M E S V T A F A R R R Q R G I C L L S G S G T V T N V T L R Q P A S - P - - - S A V
 
AT2G45430.1     V N L H G R F E I L S L S G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V G G S V V G P L M A S G P V V I M A A S
gm005962_Glyma0    V T L H G R F E I L S L S G S F L P P P A P P A A S G L A I Y L A G G Q G Q V V G G S V V G P L V A S G P V V I M A A S
 
AT2G45430.1     F G N A A Y E R L P L E E D D Q E E Q T A G A V A N N I D G N A T M G - G G T Q T Q T Q T Q - Q Q Q Q Q Q L M Q D P - -
gm005962_Glyma0    F G N A A Y E R L P L E E E E T P V P Y H G T - - - - - E G L G S P G I P G T Q Q Q S Q S Q P Q Q Q Q Q Q L V G D P N S
 
AT2G45430.1     T S F I Q G L P P N L M N S V Q L P A E A Y W - G T P R P S F
gm005962_Glyma0    S S L F H G V P Q N L L N S I Q L P A E G Y W G G S A R P P F
 
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