fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005933 GDMNKQLRLKLEAEGF in 164/245 AT2G45650.1 not_1st 0.567510548 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45650.1     MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV
gm005933_Glyma0 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV
                *******:****************************************************

AT2G45650.1     GIESTIERYNRCYNCSLSNNKPEE-----TTQSWCQEVTKLKSKYESLVRTNRNLLGEDL
gm005933_Glyma0 GTTNTIERYQR------SSFTPQDEHVECETQSWYQEVSKLKAKYESLQRTQRHLLGEDL
                *  .*****:*      *. .*::      **** ***:***:***** **:*:******

AT2G45650.1     GEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGH
gm005933_Glyma0 GPLNIKELQNIEKQLEGALAQARQRKTQIMIEQMEELRRRERHLGDMNKQLRLKLEAEGF
                * :.:**** :*:***.**: :******:*:*:**:**::**:***:****::*:*:**.

AT2G45650.1     AFKTFQDLWANSAASVAGDPNNSEFPV-EPSHPNVLDCNT-EPFLQIGFQQHYYVQGEGS
gm005933_Glyma0 NLKATESLL--SFTSAAG---NSGFHFQQPPQTNPIDYQQPEPFLQIGY--HQYVQSEAS
                 :*: :.*   * :*.**   ** * . :*.:.* :* :  *******:  * ***.*.*

AT2G45650.1     SVSKSNVAGETNFVQGWVL
gm005933_Glyma0 NVPKS-MACETNFMQGWIL
                .*.** :* ****:***:*
BoxShade v3.31 C (beta, 970507) Output
AT2G45650.1     M G R G R V E M K R I E N K I N R Q V T F S K R R N G L L K K A Y E L S V L C D A E V A L I I F S S R G K L Y E F G S V
gm005933_Glyma0    M G R G R V E L K R I E N K I N R Q V T F S K R R N G L L K K A Y E L S V L C D A E V A L I I F S S R G K L Y E F G S V
 
AT2G45650.1     G I E S T I E R Y N R C Y N C S L S N N K P E E - - - - - T T Q S W C Q E V T K L K S K Y E S L V R T N R N L L G E D L
gm005933_Glyma0    G T T N T I E R Y Q R - - - - - - S S F T P Q D E H V E C E T Q S W Y Q E V S K L K A K Y E S L Q R T Q R H L L G E D L
 
AT2G45650.1     G E M G V K E L Q A L E R Q L E A A L T A T R Q R K T Q V M M E E M E D L R K K E R Q L G D I N K Q L K I K F E T E G H
gm005933_Glyma0    G P L N I K E L Q N I E K Q L E G A L A Q A R Q R K T Q I M I E Q M E E L R R R E R H L G D M N K Q L R L K L E A E G F
 
AT2G45650.1     A F K T F Q D L W A N S A A S V A G D P N N S E F P V - E P S H P N V L D C N T - E P F L Q I G F Q Q H Y Y V Q G E G S
gm005933_Glyma0    N L K A T E S L L - - S F T S A A G - - - N S G F H F Q Q P P Q T N P I D Y Q Q P E P F L Q I G Y - - H Q Y V Q S E A S
 
AT2G45650.1     S V S K S N V A G E T N F V Q G W V L
gm005933_Glyma0    N V P K S - M A C E T N F M Q G W I L
 
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