fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017807 not found in 283aa AT2G45680.1 1st_1st 0.484848484 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45680.1     MATIQKLEEVAGKDQTLRAVDLTIINGVRNVETSRPFQVNPTVSLEPKAEPVMPSFSMSL
gm017807_Glyma0 ---------------------------------------------------MSKALAQAQ
                                                                   :  ::: : 

AT2G45680.1     APPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLE
gm017807_Glyma0 AQAQAQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLE
                * ..: . * **************************************************

AT2G45680.1     NAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMGENLMKKKRKRPSNSEYIDISD
gm017807_Glyma0 HAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDQEPGDQPERKKRKRPANSAYVDIND
                :******************************: :*.: *::  :******:** *:**.*

AT2G45680.1     -AVSASSGLAP-------IATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNAMIPTV
gm017807_Glyma0 AAVSISTGLASSNNNNQNAATTTTMTIPQHTAIP------LPQGMVPVWAIPSNAVVPAA
                 *** *:***.        *****:  **  * .      ***** *:*******::*:.

AT2G45680.1     GAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVSVSD
gm017807_Glyma0 GAFFVVPQTASFQHQPQFFTI----ARPIS--AFVSSLVTPVQPQPTSITSSSNANASST
                ****::** *. .:***::::    * * *  * *..  * .:* * .:..**.  : * 

AT2G45680.1     VSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTTTAR
gm017807_Glyma0 APSSKSAARATVMAPTTTTA---------TTTTTQMLRDFSLEIYDKQEL-QFMSR----
                ...*: :  ::****::::.         :****: *********:**** ****     

AT2G45680.1     SSNH
gm017807_Glyma0 ----
BoxShade v3.31 C (beta, 970507) Output
AT2G45680.1     M A T I Q K L E E V A G K D Q T L R A V D L T I I N G V R N V E T S R P F Q V N P T V S L E P K A E P V M P S F S M S L
gm017807_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S K A L A Q A Q
 
AT2G45680.1     A P P S S T G P P L K R A S T K D R H T K V E G R G R R I R M P A T C A A R I F Q L T R E L G H K S D G E T I R W L L E
gm017807_Glyma0    A Q A Q A Q A Q P Q K R A S T K D R H T K V E G R G R R I R M P A T C A A R I F Q L T R E L G H K S D G E T I R W L L E
 
AT2G45680.1     N A E P A I I A A T G T G T V P A I A M S V N G T L K I P T T T N A D S D M G E N L M K K K R K R P S N S E Y I D I S D
gm017807_Glyma0    H A E P A I I A A T G T G T V P A I A M S V N G T L K I P T T S P S D Q E P G D Q P E R K K R K R P A N S A Y V D I N D
 
AT2G45680.1     - A V S A S S G L A P - - - - - - - I A T T T T I Q P P Q A L A S S T V A Q Q L L P Q G M Y P M W A I P S N A M I P T V
gm017807_Glyma0    A A V S I S T G L A S S N N N N Q N A A T T T T M T I P Q H T A I P - - - - - - L P Q G M V P V W A I P S N A V V P A A
 
AT2G45680.1     G A F F L I P Q I A G P S N Q P Q L L A F P A A A A S P S S Y V A A V Q Q A S T M A R P P P L Q V V P S S G F V S V S D
gm017807_Glyma0    G A F F V V P Q T A S F Q H Q P Q F F T I - - - - A R P I S - - A F V S S L V T P V Q P Q P T S I T S S S N A N A S S T
 
AT2G45680.1     V S G S N L S R A T S V M A P S S S S G V T T G S S S S I A T T T T H T L R D F S L E I Y E K Q E L H Q F M S T T T A R
gm017807_Glyma0    A P S S K S A A R A T V M A P T T T T A - - - - - - - - - T T T T T Q M L R D F S L E I Y D K Q E L - Q F M S R - - - -
 
AT2G45680.1     S S N H
gm017807_Glyma0    - - - -
 
0