fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005856 not found in 340aa AT2G45850.2 1st_not 0.466546112 II
Pt017496 not found in 336aa AT2G45850.2 1st_not 0.468354430 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45850.1     MDRRDAMGLSGSGSYYIHRGLSGSGPPTF-HGSPQQQQGLRHLPNQNSPF-----GSGST
gm005856_Glyma0 MDRGDQMTLPGSASYYMQRGIPGAGNQPVLHNSPN----IGPLSNPNLPCQSSIGGGGTI
pt017496_POPTR_ MDRRDAMAISGSASFYMHRGITSSGSMNV---SSN----INTLSNTNVAFQPNI-GANTM
                *** * * :.**.*:*::**:..:*   .   *.:    :  *.* * .      *..: 

AT2G45850.1     GFGSPSLHGDPSLATAAGGAGALPHHIGVNMIAPP--PPPSETPMKRKRGRPRKYGQDGS
gm005856_Glyma0 GSTLPLESS-----------GISAP--CVNVSAPSGTLP--GETVKRKRGRPRKYGSDGA
pt017496_POPTR_ GSTLPMEHP----------VAISPH--GVNVGVPS-TMPPSGEPVKRKRGRPRKYGPDGA
                *   *               .  .    **: .*.   *    .:*********** **:

AT2G45850.1     VSLALSSSSVS---TITPNNSNKRGRGRPPGSGKKQRMASVGELMPSSSGMSFTPHVIAV
gm005856_Glyma0 VSLALTPTPASHPGALAQ--GQKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITI
pt017496_POPTR_ VSLALSSSLSTHPGTITP--SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITI
                *****:.:  :   :::   .:*********:*:**::**:** :..*:**.****:*::

AT2G45850.1     SIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAIKYEGRFEILALSTSY
gm005856_Glyma0 AVGEDIATKIMSFSQQGPRAICILSANGAVSTVTLRQPSTSGGTVTYEGRFEIVCLSGSY
pt017496_POPTR_ AVGEDIATKIMSFSQQGPRAVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSY
                ::*****:*:::********:*:***.*****.** ***:* *::.*******:.** **

AT2G45850.1     IVATDGSFRNRTGNLSVSLASPDGRVIGGAIGGPLIAASPVQVIVGSFIW-AAPKIKSKK
gm005856_Glyma0 LVADSGGSRNRTGGLSVSLASPDGRVVGGGVGGVLIAASPVQVILGSFSW-GASKTKIKK
pt017496_POPTR_ LLTNDGGSRNRSGGLSVSLASPDGRVIGGGVGGVLIAASPVQVIVGSFLWGGGSKTKNKK
                ::: .*. ***:*.************:**.:** **********:*** * ...* * **

AT2G45850.1     RE-EEASEVVQETDDHHVLDNNNNTISPVPQQ--QPNQNL-------IWSTGSRQMDMRH
gm005856_Glyma0 KEGSEGAEVALET-DHQTVHN------PVAVNSISPNQNLTPTSSLSPWP-ASRSLDMRN
pt017496_POPTR_ VEGPEGAR---DS-DHQTVEN------PVTPTSVQPSQNLTPTSSMGVWP-GSRPVDMRS
                 *  *.:.   :: **:.:.*      **.    .*.***        *. .** :*** 

AT2G45850.1     AHADIDLMRG
gm005856_Glyma0 SHIDIDLMRG
pt017496_POPTR_ THVDIDLMRG
                :* *******
BoxShade v3.31 C (beta, 970507) Output
AT2G45850.1     M D R R D A M G L S G S G S Y Y I H R G L S G S G P P T F - H G S P Q Q Q Q G L R H L P N Q N S P F - - - - - G S G S T
gm005856_Glyma0    M D R G D Q M T L P G S A S Y Y M Q R G I P G A G N Q P V L H N S P N - - - - I G P L S N P N L P C Q S S I G G G G T I
pt017496_POPTR_    M D R R D A M A I S G S A S F Y M H R G I T S S G S M N V - - - S S N - - - - I N T L S N T N V A F Q P N I - G A N T M
 
AT2G45850.1     G F G S P S L H G D P S L A T A A G G A G A L P H H I G V N M I A P P - - P P P S E T P M K R K R G R P R K Y G Q D G S
gm005856_Glyma0    G S T L P L E S S - - - - - - - - - - - G I S A P - - C V N V S A P S G T L P - - G E T V K R K R G R P R K Y G S D G A
pt017496_POPTR_    G S T L P M E H P - - - - - - - - - - V A I S P H - - G V N V G V P S - T M P P S G E P V K R K R G R P R K Y G P D G A
 
AT2G45850.1     V S L A L S S S S V S - - - T I T P N N S N K R G R G R P P G S G K K Q R M A S V G E L M P S S S G M S F T P H V I A V
gm005856_Glyma0    V S L A L T P T P A S H P G A L A Q - - G Q K R G R G R P P G S G K K Q Q L A S L G E L M S G S A G M G F T P H I I T I
pt017496_POPTR_    V S L A L S S S L S T H P G T I T P - - S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I
 
AT2G45850.1     S I G E D I A S K V I A F S Q Q G P R A I C V L S A S G A V S T A T L I Q P S A S P G A I K Y E G R F E I L A L S T S Y
gm005856_Glyma0    A V G E D I A T K I M S F S Q Q G P R A I C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I V C L S G S Y
pt017496_POPTR_    A V G E D I A T K I M S F S Q Q G P R A V C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I L C L S G S Y
 
AT2G45850.1     I V A T D G S F R N R T G N L S V S L A S P D G R V I G G A I G G P L I A A S P V Q V I V G S F I W - A A P K I K S K K
gm005856_Glyma0    L V A D S G G S R N R T G G L S V S L A S P D G R V V G G G V G G V L I A A S P V Q V I L G S F S W - G A S K T K I K K
pt017496_POPTR_    L L T N D G G S R N R S G G L S V S L A S P D G R V I G G G V G G V L I A A S P V Q V I V G S F L W G G G S K T K N K K
 
AT2G45850.1     R E - E E A S E V V Q E T D D H H V L D N N N N T I S P V P Q Q - - Q P N Q N L - - - - - - - I W S T G S R Q M D M R H
gm005856_Glyma0    K E G S E G A E V A L E T - D H Q T V H N - - - - - - P V A V N S I S P N Q N L T P T S S L S P W P - A S R S L D M R N
pt017496_POPTR_    V E G P E G A R - - - D S - D H Q T V E N - - - - - - P V T P T S V Q P S Q N L T P T S S M G V W P - G S R P V D M R S
 
AT2G45850.1     A H A D I D L M R G
gm005856_Glyma0    S H I D I D L M R G
pt017496_POPTR_    T H V D I D L M R G
 
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