fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017496 not found in 336aa AT2G45850.2 1st_not 0.468354430 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45850.1     MDRRDAMGLSGSGSYYIHRGLSGSGPPTFHGSPQQQQGLRHLPNQNSPF----GSGSTGF
pt017496_POPTR_ MDRRDAMAISGSASFYMHRGITSS------GSMNVSSNINTLSNTNVAFQPNIGANTMGS
                *******.:***.*:*:***::.*      ** : ...:. *.* * .*    *:.: * 

AT2G45850.1     GSPSLHGDPSLATAAGGAGALPHHIGVNMIAPPP-PPSETPMKRKRGRPRKYGQDGSVSL
pt017496_POPTR_ TLPMEH--PVAIS--------PH--GVNVGVPSTMPPSGEPVKRKRGRPRKYGPDGAVSL
                  *  *  *   :        **  ***: .*.. ***  *:*********** **:***

AT2G45850.1     ALSSSSVS---TITPNNSNKRGRGRPPGSGKKQRMASVGELMPSSSGMSFTPHVIAVSIG
pt017496_POPTR_ ALSSSLSTHPGTITP--SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVG
                *****  :   ****  *:*********:*:**::**:** :..*:**.****:*::::*

AT2G45850.1     EDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAIKYEGRFEILALSTSYIVA
pt017496_POPTR_ EDIATKIMSFSQQGPRAVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLT
                ****:*:::********:*:***.*****.** ***:* *::.********.** **:::

AT2G45850.1     TDGSFRNRTGNLSVSLASPDGRVIGGAIGGPLIAASPVQVIVGSFIWAAPKIKSKKREEE
pt017496_POPTR_ NDGGSRNRSGGLSVSLASPDGRVIGGGVGGVLIAASPVQVIVGSFLWGGGS-KTKNKKVE
                .**. ***:*.***************.:** **************:*.. . *:*::: *

AT2G45850.1     ASEVVQETDDHHVLDNNNNTISPVPQQQPNQNL-------IWSTGSRQMDMRHAHADIDL
pt017496_POPTR_ GPEGARDSDHQTV----ENPVTPT-SVQPSQNLTPTSSMGVWP-GSRPVDMRSTHVDIDL
                ..* .:::*.: *    :*.::*. . **.***       :*. *** :*** :*.****

AT2G45850.1     MRG
pt017496_POPTR_ MRG
                ***
BoxShade v3.31 C (beta, 970507) Output
AT2G45850.1     M D R R D A M G L S G S G S Y Y I H R G L S G S G P P T F H G S P Q Q Q Q G L R H L P N Q N S P F - - - - G S G S T G F
pt017496_POPTR_    M D R R D A M A I S G S A S F Y M H R G I T S S - - - - - - G S M N V S S N I N T L S N T N V A F Q P N I G A N T M G S
 
AT2G45850.1     G S P S L H G D P S L A T A A G G A G A L P H H I G V N M I A P P P - P P S E T P M K R K R G R P R K Y G Q D G S V S L
pt017496_POPTR_    T L P M E H - - P V A I S - - - - - - - - P H - - G V N V G V P S T M P P S G E P V K R K R G R P R K Y G P D G A V S L
 
AT2G45850.1     A L S S S S V S - - - T I T P N N S N K R G R G R P P G S G K K Q R M A S V G E L M P S S S G M S F T P H V I A V S I G
pt017496_POPTR_    A L S S S L S T H P G T I T P - - S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I A V G
 
AT2G45850.1     E D I A S K V I A F S Q Q G P R A I C V L S A S G A V S T A T L I Q P S A S P G A I K Y E G R F E I L A L S T S Y I V A
pt017496_POPTR_    E D I A T K I M S F S Q Q G P R A V C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I L C L S G S Y L L T
 
AT2G45850.1     T D G S F R N R T G N L S V S L A S P D G R V I G G A I G G P L I A A S P V Q V I V G S F I W A A P K I K S K K R E E E
pt017496_POPTR_    N D G G S R N R S G G L S V S L A S P D G R V I G G G V G G V L I A A S P V Q V I V G S F L W G G G S - K T K N K K V E
 
AT2G45850.1     A S E V V Q E T D D H H V L D N N N N T I S P V P Q Q Q P N Q N L - - - - - - - I W S T G S R Q M D M R H A H A D I D L
pt017496_POPTR_    G P E G A R D S D H Q T V - - - - E N P V T P T - S V Q P S Q N L T P T S S M G V W P - G S R P V D M R S T H V D I D L
 
AT2G45850.1     M R G
pt017496_POPTR_    M R G
 
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