fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039055 not found in 328aa AT2G45850.2 not_not 0.432188065 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G45850.1     MDRRDAMGLSGSGSYYIHRGLSGSGPPTFHGSPQQQQGLRHLPNQNSPF--GSGSTGFGS
pt039055_POPTR_ MDRRDTMTISGSASFF----MQGSGT---HPSLNVSSGINTLSNINAPFQPNMGANTMGS
                *****:* :***.*::    :.***.   * * : ..*:. *.* *:**  . *:. :**

AT2G45850.1     PSLHGDPSLATAAGGAGALPHHIGVNMIAPPPPPSETPMKRKRGRPRKYGQDGSVSLALS
pt039055_POPTR_ ALLMEHP----AAISVGELSTMV-----------SGQPEKRKRGRPRKYGPDGAVSLALS
                . *  .*    ** ..* *.  :           *  * *********** **:******

AT2G45850.1     SS-SVSTITPNNSNKRGRGRPPGSGKKQRMASVGELMPSSSGMSFTPHVIAVSIGEDIAS
pt039055_POPTR_ PSLSTHPETSIPSQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDIAT
                .* *. . *.  *:*********:*:**::**:** :..*:**.****:*::::*****:

AT2G45850.1     KVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAIKYEGRFEILALSTSYIVATDGSF
pt039055_POPTR_ KIMSFSQQGPRAICILSANGAVSTVTLHQPSTSGGTVTYEGRFEILCLSGSYLFSKDGGS
                *:::**********:***.*****.** ***:* *::.********.** **:.:.**. 

AT2G45850.1     RNRTGNLSVSLASPDGRVIGGAIGGPLIAASPVQVIVGSFIWAAPKIKSKKREEEASEVV
pt039055_POPTR_ RNRTGGLSVSLASPDGCVIGGGVGGVLIAASPVQVIAGSFLWGGSKTKNKK--VEGAEVA
                *****.********** ****.:** **********.***:*...* *.**   *.:**.

AT2G45850.1     QETDDHHVLDNNNNTISPVPQQQPNQNL-------IWSTGSRQMDMRHAHADIDLMRG
pt039055_POPTR_ RDSDHQTV----ENPVTPT-SVQPSLNLTPTSSMGVWP-GSRSVDMRNTHVDIDLMRG
                :::*.: *    :*.::*. . **. **       :*. ***.:***::*.*******
BoxShade v3.31 C (beta, 970507) Output
AT2G45850.1     M D R R D A M G L S G S G S Y Y I H R G L S G S G P P T F H G S P Q Q Q Q G L R H L P N Q N S P F - - G S G S T G F G S
pt039055_POPTR_    M D R R D T M T I S G S A S F F - - - - M Q G S G T - - - H P S L N V S S G I N T L S N I N A P F Q P N M G A N T M G S
 
AT2G45850.1     P S L H G D P S L A T A A G G A G A L P H H I G V N M I A P P P P P S E T P M K R K R G R P R K Y G Q D G S V S L A L S
pt039055_POPTR_    A L L M E H P - - - - A A I S V G E L S T M V - - - - - - - - - - - S G Q P E K R K R G R P R K Y G P D G A V S L A L S
 
AT2G45850.1     S S - S V S T I T P N N S N K R G R G R P P G S G K K Q R M A S V G E L M P S S S G M S F T P H V I A V S I G E D I A S
pt039055_POPTR_    P S L S T H P E T S I P S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I A V G E D I A T
 
AT2G45850.1     K V I A F S Q Q G P R A I C V L S A S G A V S T A T L I Q P S A S P G A I K Y E G R F E I L A L S T S Y I V A T D G S F
pt039055_POPTR_    K I M S F S Q Q G P R A I C I L S A N G A V S T V T L H Q P S T S G G T V T Y E G R F E I L C L S G S Y L F S K D G G S
 
AT2G45850.1     R N R T G N L S V S L A S P D G R V I G G A I G G P L I A A S P V Q V I V G S F I W A A P K I K S K K R E E E A S E V V
pt039055_POPTR_    R N R T G G L S V S L A S P D G C V I G G G V G G V L I A A S P V Q V I A G S F L W G G S K T K N K K - - V E G A E V A
 
AT2G45850.1     Q E T D D H H V L D N N N N T I S P V P Q Q Q P N Q N L - - - - - - - I W S T G S R Q M D M R H A H A D I D L M R G
pt039055_POPTR_    R D S D H Q T V - - - - E N P V T P T - S V Q P S L N L T P T S S M G V W P - G S R S V D M R N T H V D I D L M R G
 
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