fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G45850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017496 not found in 336aa AT2G45850.2 1st_not 0.468354430 II
Pt039055 not found in 328aa AT2G45850.2 not_not 0.432188065 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G45850.1     MDRRDAMGLSGSGSYYIHRGLSGSGPPTFHGSPQQQQGLRHLPNQNSPF--GSGSTGFGS
pt017496_POPTR_ MDRRDAMAISGSASFYMHRGITS------SGSMNVSSNINTLSNTNVAFQPNIGANTMGS
pt039055_POPTR_ MDRRDTMTISGSASFFM-QGSGT------HPSLNVSSGINTLSNINAPFQPNMGANTMGS
                *****:* :***.*::: :*           * : ...:. *.* * .*  . *:. :**

AT2G45850.1     PSLHGDPSLATAAGGAGALPHHIGVNMIAPPPPPSETPMKRKRGRPRKYGQDGSVSLALS
pt017496_POPTR_ TLPMEHPVAIS--------PHGVNVGVPSTM-PPSGEPVKRKRGRPRKYGPDGAVSLALS
pt039055_POPTR_ ALLMEHPAAIS-------------VGELSTM--VSGQPEKRKRGRPRKYGPDGAVSLALS
                .    .*   :             *.  :.    *  * *********** **:******

AT2G45850.1     SSSVS---TITPNNSNKRGRGRPPGSGKKQRMASVGELMPSSSGMSFTPHVIAVSIGEDI
pt017496_POPTR_ SSLSTHPGTITP--SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDI
pt039055_POPTR_ PSLSTHPETSIP--SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDI
                .*  :   *  *  *:*********:*:**::**:** :..*:**.****:*::::****

AT2G45850.1     ASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAIKYEGRFEILALSTSYIVATDG
pt017496_POPTR_ ATKIMSFSQQGPRAVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLTNDG
pt039055_POPTR_ ATKIMSFSQQGPRAICILSANGAVSTVTLHQPSTSGGTVTYEGRFEILCLSGSYLFSKDG
                *:*:::********:*:***.*****.** ***:* *::.********.** **:.:.**

AT2G45850.1     SFRNRTGNLSVSLASPDGRVIGGAIGGPLIAASPVQVIVGSFIW-AAPKIKSKKREEEAS
pt017496_POPTR_ GSRNRSGGLSVSLASPDGRVIGGGVGGVLIAASPVQVIVGSFLWGGGSKTKNKK--VEGP
pt039055_POPTR_ GSRNRTGGLSVSLASPDGCVIGGGVGGVLIAASPVQVIAGSFLW-GGSKTKNKK--VEGA
                . ***:*.********** ****.:** **********.***:* ...* *.**   *..

AT2G45850.1     EVVQETDDHHVLDNNNNTISPVPQQQPNQNL-------IWSTGSRQMDMRHAHADIDLMR
pt017496_POPTR_ EGARDSDHQTV----ENPVTPT-SVQPSQNLTPTSSMGVWP-GSRPVDMRSTHVDIDLMR
pt039055_POPTR_ EVARDSDHQTV----ENPVTPT-SVQPSLNLTPTSSMGVWP-GSRSVDMRNTHVDIDLMR
                * .:::*.: *    :*.::*. . **. **       :*. *** :*** :*.******

AT2G45850.1     G
pt017496_POPTR_ G
pt039055_POPTR_ G
                *
BoxShade v3.31 C (beta, 970507) Output
AT2G45850.1     M D R R D A M G L S G S G S Y Y I H R G L S G S G P P T F H G S P Q Q Q Q G L R H L P N Q N S P F - - G S G S T G F G S
pt017496_POPTR_    M D R R D A M A I S G S A S F Y M H R G I T S - - - - - - S G S M N V S S N I N T L S N T N V A F Q P N I G A N T M G S
pt039055_POPTR_    M D R R D T M T I S G S A S F F M - Q G S G T - - - - - - H P S L N V S S G I N T L S N I N A P F Q P N M G A N T M G S
 
AT2G45850.1     P S L H G D P S L A T A A G G A G A L P H H I G V N M I A P P P P P S E T P M K R K R G R P R K Y G Q D G S V S L A L S
pt017496_POPTR_    T L P M E H P V A I S - - - - - - - - P H G V N V G V P S T M - P P S G E P V K R K R G R P R K Y G P D G A V S L A L S
pt039055_POPTR_    A L L M E H P A A I S - - - - - - - - - - - - - V G E L S T M - - V S G Q P E K R K R G R P R K Y G P D G A V S L A L S
 
AT2G45850.1     S S S V S - - - T I T P N N S N K R G R G R P P G S G K K Q R M A S V G E L M P S S S G M S F T P H V I A V S I G E D I
pt017496_POPTR_    S S L S T H P G T I T P - - S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I A V G E D I
pt039055_POPTR_    P S L S T H P E T S I P - - S Q K R G R G R P P G T G R K Q Q L A S L G E W L S G S A G M G F T P H I I T I A V G E D I
 
AT2G45850.1     A S K V I A F S Q Q G P R A I C V L S A S G A V S T A T L I Q P S A S P G A I K Y E G R F E I L A L S T S Y I V A T D G
pt017496_POPTR_    A T K I M S F S Q Q G P R A V C I L S A N G A V S T V T L R Q P S T S G G T V T Y E G R F E I L C L S G S Y L L T N D G
pt039055_POPTR_    A T K I M S F S Q Q G P R A I C I L S A N G A V S T V T L H Q P S T S G G T V T Y E G R F E I L C L S G S Y L F S K D G
 
AT2G45850.1     S F R N R T G N L S V S L A S P D G R V I G G A I G G P L I A A S P V Q V I V G S F I W - A A P K I K S K K R E E E A S
pt017496_POPTR_    G S R N R S G G L S V S L A S P D G R V I G G G V G G V L I A A S P V Q V I V G S F L W G G G S K T K N K K - - V E G P
pt039055_POPTR_    G S R N R T G G L S V S L A S P D G C V I G G G V G G V L I A A S P V Q V I A G S F L W - G G S K T K N K K - - V E G A
 
AT2G45850.1     E V V Q E T D D H H V L D N N N N T I S P V P Q Q Q P N Q N L - - - - - - - I W S T G S R Q M D M R H A H A D I D L M R
pt017496_POPTR_    E G A R D S D H Q T V - - - - E N P V T P T - S V Q P S Q N L T P T S S M G V W P - G S R P V D M R S T H V D I D L M R
pt039055_POPTR_    E V A R D S D H Q T V - - - - E N P V T P T - S V Q P S L N L T P T S S M G V W P - G S R S V D M R N T H V D I D L M R
 
AT2G45850.1     G
pt017496_POPTR_    G
pt039055_POPTR_    G
 
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