Input
| Putative repression domain
|
|
AT2G46410.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt039931 |
not found in 92aa |
AT5G53200.1 |
not_not |
0.606557377 |
III |
Pt023384 |
not found in 97aa |
AT5G53200.1 |
not_not |
0.584699453 |
III |
Pt026754 |
not found in 95aa |
AT5G53200.1 |
not_not |
0.551912568 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT2G46410.1 MFRSDKAEKMD---KRRRRQSKAKASCS-EEVSSIEWEAVKMSEEEEDLISRMYKLVGDR
pt026754_POPTR_ ------MESMN--RRRRRKQPKINSSES-EEVSSIEWEFINMSEQEEDLIYRMHRLVGER
pt039931_POPTR_ ---------MD---RRRRKQAKTTTHCSDQEVSSIEWEFINMSEQEEDLIYRMYKLVGDR
pt023384_POPTR_ ------MESMDRRRRRRRKQAKINNSES-EEVSSIEWEFIDMSEQEEDLIYRMYRLVGER
*: :***:*.* . * :******** :.***:***** **::***:*
AT2G46410.1 WELIAGRIPGRTPEEIERYWLMKHGVVFANRRRDFFRK-------
pt026754_POPTR_ WDLIAGRIPGRKAEEIERFWIMKHREGFAENGKLYNE-VKSRTSS
pt039931_POPTR_ WALIAGRIPGRKAEEIERYWIMRHCEGFASRRKEQKRDVIPNTS-
pt023384_POPTR_ WDLIAGRIPGRKAEEIERFWIMKHREGFAEKRRLHSK-AKSKTYR
* *********..*****:*:*:* **.. : .
BoxShade v3.31 C (beta, 970507) Output
AT2G46410.1 |
M |
F |
R |
S |
D |
K |
A |
E |
K |
M |
D |
- |
- |
- |
K |
R |
R |
R |
R |
Q |
S |
K |
A |
K |
A |
S |
C |
S |
- |
E |
E |
V |
S |
S |
I |
E |
W |
E |
A |
V |
K |
M |
S |
E |
E |
E |
E |
D |
L |
I |
S |
R |
M |
Y |
K |
L |
V |
G |
D |
R |
pt026754_POPTR_ |
- |
- |
- |
- |
- |
- |
M |
E |
S |
M |
N |
- |
- |
R |
R |
R |
R |
R |
K |
Q |
P |
K |
I |
N |
S |
S |
E |
S |
- |
E |
E |
V |
S |
S |
I |
E |
W |
E |
F |
I |
N |
M |
S |
E |
Q |
E |
E |
D |
L |
I |
Y |
R |
M |
H |
R |
L |
V |
G |
E |
R |
pt039931_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
D |
- |
- |
- |
R |
R |
R |
R |
K |
Q |
A |
K |
T |
T |
T |
H |
C |
S |
D |
Q |
E |
V |
S |
S |
I |
E |
W |
E |
F |
I |
N |
M |
S |
E |
Q |
E |
E |
D |
L |
I |
Y |
R |
M |
Y |
K |
L |
V |
G |
D |
R |
pt023384_POPTR_ |
- |
- |
- |
- |
- |
- |
M |
E |
S |
M |
D |
R |
R |
R |
R |
R |
R |
R |
K |
Q |
A |
K |
I |
N |
N |
S |
E |
S |
- |
E |
E |
V |
S |
S |
I |
E |
W |
E |
F |
I |
D |
M |
S |
E |
Q |
E |
E |
D |
L |
I |
Y |
R |
M |
Y |
R |
L |
V |
G |
E |
R |
|
AT2G46410.1 |
W |
E |
L |
I |
A |
G |
R |
I |
P |
G |
R |
T |
P |
E |
E |
I |
E |
R |
Y |
W |
L |
M |
K |
H |
G |
V |
V |
F |
A |
N |
R |
R |
R |
D |
F |
F |
R |
K |
- |
- |
- |
- |
- |
- |
- |
pt026754_POPTR_ |
W |
D |
L |
I |
A |
G |
R |
I |
P |
G |
R |
K |
A |
E |
E |
I |
E |
R |
F |
W |
I |
M |
K |
H |
R |
E |
G |
F |
A |
E |
N |
G |
K |
L |
Y |
N |
E |
- |
V |
K |
S |
R |
T |
S |
S |
pt039931_POPTR_ |
W |
A |
L |
I |
A |
G |
R |
I |
P |
G |
R |
K |
A |
E |
E |
I |
E |
R |
Y |
W |
I |
M |
R |
H |
C |
E |
G |
F |
A |
S |
R |
R |
K |
E |
Q |
K |
R |
D |
V |
I |
P |
N |
T |
S |
- |
pt023384_POPTR_ |
W |
D |
L |
I |
A |
G |
R |
I |
P |
G |
R |
K |
A |
E |
E |
I |
E |
R |
F |
W |
I |
M |
K |
H |
R |
E |
G |
F |
A |
E |
K |
R |
R |
L |
H |
S |
K |
- |
A |
K |
S |
K |
T |
Y |
R |
|
|