fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G46410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016529 not found in 88aa AT2G46410.1 1st_1st 0.617486338 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G46410.1     MFRSDKAEKMDKRRRRQSKAKASCSE-EVSSIEWEAVKMSEEEEDLISRMYKLVGDRWEL
pt016529_POPTR_ ---------MDRRRKKQAKTTSCCSEQEVSSIEWEFINMSEQEEDLIYRMHNLVGDRWAL
                         **:**::*:*:.:.*** ******** ::***:***** **::****** *

AT2G46410.1     IAGRIPGRTPEEIERYWLMKHGVVFANRRRDFFRK--
pt016529_POPTR_ IAGRIPGRKAEEIERFWLMRHGEGFASRRREQKRCHS
                ********..*****:***:**  **.***:  *
BoxShade v3.31 C (beta, 970507) Output
AT2G46410.1     M F R S D K A E K M D K R R R R Q S K A K A S C S E - E V S S I E W E A V K M S E E E E D L I S R M Y K L V G D R W E L
pt016529_POPTR_    - - - - - - - - - M D R R R K K Q A K T T S C C S E Q E V S S I E W E F I N M S E Q E E D L I Y R M H N L V G D R W A L
 
AT2G46410.1     I A G R I P G R T P E E I E R Y W L M K H G V V F A N R R R D F F R K - -
pt016529_POPTR_    I A G R I P G R K A E E I E R F W L M R H G E G F A S R R R E Q K R C H S
 
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