fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G46680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017366 not found in 238aa AT2G46680.1 1st_1st 0.477541371 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G46680.1     MTEGGEYSPAMMSAEPFLTMKKMKKSNHNKNN-QRRFSDEQIKSLEMMFESETRLEPRKK
pt017366_POPTR_ MFDGGEYSPS--ATEPFSCLNSVTTSRKKKNKIKRRFSDEQIKSLETMFESETRLEPRKK
                * :******:  ::***  ::.:..*.::**: :************ *************

AT2G46680.1     VQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVS
pt017366_POPTR_ MQLARELGLQPRQVAIWFQNKRARWKSKQLERDYSMLRANYNSLASRFETLKKEKQALAI
                :****************************** :*.:** **:.***:**:********. 

AT2G46680.1     ELQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEENRRRKPEEVRPEMEMKDDKG
pt017366_POPTR_ QLQKLNDLMKKPVEEGE--CCGQGA--AVNSSEGESENGDATKGE-SETKPRLSIEQPEH
                :**:*::  :* .:* *  *.*: *  *:.*:. **** :  : : .*.:*.:.::: : 

AT2G46680.1     HHGVMCDHHDYEDDDNGYSNNIKREYFGGFEEEPDHLMNIVEPADSCLTSSDDWRGFKSD
pt017366_POPTR_ GLGVLSD----ED------SSIKVDYF-ELEEEPN-LMSMVEPAEGSLTSQEDWGSIDSD
                  **:.*    **      ..** :**  :****: **.:****:..***.:** .:.**

AT2G46680.1     TTTLLDQSSNNYPWRDFWS
pt017366_POPTR_ --GLFDQSSSGYQWWDFWA
                   *:****..* * ***:
BoxShade v3.31 C (beta, 970507) Output
AT2G46680.1     M T E G G E Y S P A M M S A E P F L T M K K M K K S N H N K N N - Q R R F S D E Q I K S L E M M F E S E T R L E P R K K
pt017366_POPTR_    M F D G G E Y S P S - - A T E P F S C L N S V T T S R K K K N K I K R R F S D E Q I K S L E T M F E S E T R L E P R K K
 
AT2G46680.1     V Q L A R E L G L Q P R Q V A I W F Q N K R A R W K S K Q L E T E Y N I L R Q N Y D N L A S Q F E S L K K E K Q A L V S
pt017366_POPTR_    M Q L A R E L G L Q P R Q V A I W F Q N K R A R W K S K Q L E R D Y S M L R A N Y N S L A S R F E T L K K E K Q A L A I
 
AT2G46680.1     E L Q R L K E A T Q K K T Q E E E R Q C S G D Q A V V A L S S T H H E S E N E E N R R R K P E E V R P E M E M K D D K G
pt017366_POPTR_    Q L Q K L N D L M K K P V E E G E - - C C G Q G A - - A V N S S E G E S E N G D A T K G E - S E T K P R L S I E Q P E H
 
AT2G46680.1     H H G V M C D H H D Y E D D D N G Y S N N I K R E Y F G G F E E E P D H L M N I V E P A D S C L T S S D D W R G F K S D
pt017366_POPTR_    G L G V L S D - - - - E D - - - - - - S S I K V D Y F - E L E E E P N - L M S M V E P A E G S L T S Q E D W G S I D S D
 
AT2G46680.1     T T T L L D Q S S N N Y P W R D F W S
pt017366_POPTR_    - - G L F D Q S S S G Y Q W W D F W A
 
0