Input
| Putative repression domain
|
|
AT2G46680.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt017366 |
not found in 238aa |
AT2G46680.1 |
1st_1st |
0.477541371 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G46680.1 MTEGGEYSPAMMSAEPFLTMKKMKKSNHNKNN-QRRFSDEQIKSLEMMFESETRLEPRKK
pt017366_POPTR_ MFDGGEYSPS--ATEPFSCLNSVTTSRKKKNKIKRRFSDEQIKSLETMFESETRLEPRKK
* :******: ::*** ::.:..*.::**: :************ *************
AT2G46680.1 VQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVS
pt017366_POPTR_ MQLARELGLQPRQVAIWFQNKRARWKSKQLERDYSMLRANYNSLASRFETLKKEKQALAI
:****************************** :*.:** **:.***:**:********.
AT2G46680.1 ELQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEENRRRKPEEVRPEMEMKDDKG
pt017366_POPTR_ QLQKLNDLMKKPVEEGE--CCGQGA--AVNSSEGESENGDATKGE-SETKPRLSIEQPEH
:**:*:: :* .:* * *.*: * *:.*:. **** : : : .*.:*.:.::: :
AT2G46680.1 HHGVMCDHHDYEDDDNGYSNNIKREYFGGFEEEPDHLMNIVEPADSCLTSSDDWRGFKSD
pt017366_POPTR_ GLGVLSD----ED------SSIKVDYF-ELEEEPN-LMSMVEPAEGSLTSQEDWGSIDSD
**:.* ** ..** :** :****: **.:****:..***.:** .:.**
AT2G46680.1 TTTLLDQSSNNYPWRDFWS
pt017366_POPTR_ --GLFDQSSSGYQWWDFWA
*:****..* * ***:
BoxShade v3.31 C (beta, 970507) Output
AT2G46680.1 |
M |
T |
E |
G |
G |
E |
Y |
S |
P |
A |
M |
M |
S |
A |
E |
P |
F |
L |
T |
M |
K |
K |
M |
K |
K |
S |
N |
H |
N |
K |
N |
N |
- |
Q |
R |
R |
F |
S |
D |
E |
Q |
I |
K |
S |
L |
E |
M |
M |
F |
E |
S |
E |
T |
R |
L |
E |
P |
R |
K |
K |
pt017366_POPTR_ |
M |
F |
D |
G |
G |
E |
Y |
S |
P |
S |
- |
- |
A |
T |
E |
P |
F |
S |
C |
L |
N |
S |
V |
T |
T |
S |
R |
K |
K |
K |
N |
K |
I |
K |
R |
R |
F |
S |
D |
E |
Q |
I |
K |
S |
L |
E |
T |
M |
F |
E |
S |
E |
T |
R |
L |
E |
P |
R |
K |
K |
|
AT2G46680.1 |
V |
Q |
L |
A |
R |
E |
L |
G |
L |
Q |
P |
R |
Q |
V |
A |
I |
W |
F |
Q |
N |
K |
R |
A |
R |
W |
K |
S |
K |
Q |
L |
E |
T |
E |
Y |
N |
I |
L |
R |
Q |
N |
Y |
D |
N |
L |
A |
S |
Q |
F |
E |
S |
L |
K |
K |
E |
K |
Q |
A |
L |
V |
S |
pt017366_POPTR_ |
M |
Q |
L |
A |
R |
E |
L |
G |
L |
Q |
P |
R |
Q |
V |
A |
I |
W |
F |
Q |
N |
K |
R |
A |
R |
W |
K |
S |
K |
Q |
L |
E |
R |
D |
Y |
S |
M |
L |
R |
A |
N |
Y |
N |
S |
L |
A |
S |
R |
F |
E |
T |
L |
K |
K |
E |
K |
Q |
A |
L |
A |
I |
|
AT2G46680.1 |
E |
L |
Q |
R |
L |
K |
E |
A |
T |
Q |
K |
K |
T |
Q |
E |
E |
E |
R |
Q |
C |
S |
G |
D |
Q |
A |
V |
V |
A |
L |
S |
S |
T |
H |
H |
E |
S |
E |
N |
E |
E |
N |
R |
R |
R |
K |
P |
E |
E |
V |
R |
P |
E |
M |
E |
M |
K |
D |
D |
K |
G |
pt017366_POPTR_ |
Q |
L |
Q |
K |
L |
N |
D |
L |
M |
K |
K |
P |
V |
E |
E |
G |
E |
- |
- |
C |
C |
G |
Q |
G |
A |
- |
- |
A |
V |
N |
S |
S |
E |
G |
E |
S |
E |
N |
G |
D |
A |
T |
K |
G |
E |
- |
S |
E |
T |
K |
P |
R |
L |
S |
I |
E |
Q |
P |
E |
H |
|
AT2G46680.1 |
H |
H |
G |
V |
M |
C |
D |
H |
H |
D |
Y |
E |
D |
D |
D |
N |
G |
Y |
S |
N |
N |
I |
K |
R |
E |
Y |
F |
G |
G |
F |
E |
E |
E |
P |
D |
H |
L |
M |
N |
I |
V |
E |
P |
A |
D |
S |
C |
L |
T |
S |
S |
D |
D |
W |
R |
G |
F |
K |
S |
D |
pt017366_POPTR_ |
G |
L |
G |
V |
L |
S |
D |
- |
- |
- |
- |
E |
D |
- |
- |
- |
- |
- |
- |
S |
S |
I |
K |
V |
D |
Y |
F |
- |
E |
L |
E |
E |
E |
P |
N |
- |
L |
M |
S |
M |
V |
E |
P |
A |
E |
G |
S |
L |
T |
S |
Q |
E |
D |
W |
G |
S |
I |
D |
S |
D |
|
AT2G46680.1 |
T |
T |
T |
L |
L |
D |
Q |
S |
S |
N |
N |
Y |
P |
W |
R |
D |
F |
W |
S |
pt017366_POPTR_ |
- |
- |
G |
L |
F |
D |
Q |
S |
S |
S |
G |
Y |
Q |
W |
W |
D |
F |
W |
A |
|
|