fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G46770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016783 not found in 378aa AT2G46770.1 1st_1st 0.529411764 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G46770.1     MMSKSMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWD
pt016783_POPTR_ -----MSISVNGQSQVPPGFRFHPTEEELLHYYLRKKVSYEKIDLDVIRDVDLNKLEPWD
                     *************************:*******.  :******************

AT2G46770.1     IQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRK
pt016783_POPTR_ IQERCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSTGKRIGMRK
                *** *******************************************:***.*:******

AT2G46770.1     TLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKK
pt016783_POPTR_ TLVFYKGRAPHGQKSDWIMHEYRLDD---STSDTNVSNVME--EEAAQEEGWVVCRIFKK
                **************************   *..*..* :*:.   **:*:***********

AT2G46770.1     KNLHKTLNSPVGGASLSGGGDTPKTTSSQIF---NEDTLDQFLELMGRSCKEE-------
pt016783_POPTR_ KNLNKTLDKPFSSSPISA------DTRNQMLSSCDEGTIDQTFHYMGRTCKEENVADNSA
                ***:***:.*...:.:*.       * .*::   :*.*:** :. ***:****       

AT2G46770.1     --------------LNLDPFMKLPNLESPNSQAINNCH---VSSPDTNHNIHVSNVVDTS
pt016783_POPTR_ TARYLRPVDTAINYVHHDGFMKLPSLESPNSISSQNCYQPMITDNEGSITNQMSYPLDPG
                              :: * *****.****** : :**:   ::. : . . ::*  :*..

AT2G46770.1     FVTSWAALDRLVASQLNGPTSYS---------ITAVNESHVGHDHLALPSVRSPYPSLNR
pt016783_POPTR_ -LDNWATLDRLFAYQLNGQTETSRQLPCIDPTITYCTPSTDLHHDLRLPTLRSSFP-LPS
                 : .**:****.* **** *. *         **  . *   *..* **::**.:* *  

AT2G46770.1     SASYHAGLTQEYTPEMELWNTTTSSLSSSPGPFCHVSNGSG
pt016783_POPTR_ NRSYHG--TQDYNNEIDLWNFTT---RSSPDTLCQLSNTGA
                . ***.  **:*. *::*** **    ***..:*::** ..
BoxShade v3.31 C (beta, 970507) Output
AT2G46770.1     M M S K S M S I S V N G Q S Q V P P G F R F H P T E E E L L Q Y Y L R K K V N S I E I D L D V I R D V D L N K L E P W D
pt016783_POPTR_    - - - - - M S I S V N G Q S Q V P P G F R F H P T E E E L L H Y Y L R K K V S Y E K I D L D V I R D V D L N K L E P W D
 
AT2G46770.1     I Q E M C K I G T T P Q N D W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K I I Y S N G R R I G M R K
pt016783_POPTR_    I Q E R C K I G T T P Q N D W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K V I Y S T G K R I G M R K
 
AT2G46770.1     T L V F Y K G R A P H G Q K S D W I M H E Y R L D D N I I S P E D V T V H E V V S I I G E A S Q D E G W V V C R I F K K
pt016783_POPTR_    T L V F Y K G R A P H G Q K S D W I M H E Y R L D D - - - S T S D T N V S N V M E - - E E A A Q E E G W V V C R I F K K
 
AT2G46770.1     K N L H K T L N S P V G G A S L S G G G D T P K T T S S Q I F - - - N E D T L D Q F L E L M G R S C K E E - - - - - - -
pt016783_POPTR_    K N L N K T L D K P F S S S P I S A - - - - - - D T R N Q M L S S C D E G T I D Q T F H Y M G R T C K E E N V A D N S A
 
AT2G46770.1     - - - - - - - - - - - - - - L N L D P F M K L P N L E S P N S Q A I N N C H - - - V S S P D T N H N I H V S N V V D T S
pt016783_POPTR_    T A R Y L R P V D T A I N Y V H H D G F M K L P S L E S P N S I S S Q N C Y Q P M I T D N E G S I T N Q M S Y P L D P G
 
AT2G46770.1     F V T S W A A L D R L V A S Q L N G P T S Y S - - - - - - - - - I T A V N E S H V G H D H L A L P S V R S P Y P S L N R
pt016783_POPTR_    - L D N W A T L D R L F A Y Q L N G Q T E T S R Q L P C I D P T I T Y C T P S T D L H H D L R L P T L R S S F P - L P S
 
AT2G46770.1     S A S Y H A G L T Q E Y T P E M E L W N T T T S S L S S S P G P F C H V S N G S G
pt016783_POPTR_    N R S Y H G - - T Q D Y N N E I D L W N F T T - - - R S S P D T L C Q L S N T G A
 
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