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Get sequence file Get alignment file Get formatted file made by BOXSHADE Sequence file prepared (1 sec required). Alignment has started. CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475) AT2G46870.1 ------------------------------------------------------------ gm053391_Glyma1 MELMQQVKGNYSDSR-------EEEE----AAAE-------------------------- pt016366_POPTR_ ------------------------------------------------------------ pt038767_POPTR_ MNFVEGERG-DFDKEEQGEEKQEGEE----AVKT----------------SKLLFSSPCT Os009289_Os02t0 MEFTTSSR--FSKEEED----EEQDE--------------------AGRRE-IPFMTATA Os010946_Os03t0 ----------------------------------------------------MEFITPIV pt024887_POPTR_ MEFGSGF--------------SEEDQ--------------------ISRGKGLPFSSYSS Sb022430_Sorbi1 SLKGSSSR--SEASSID----RPADLPYLPTLADGRTARSR---SIAGRRRSMEFTAP-- pt016367_POPTR_ ------------------------------------------------------------ gm008337_Glyma0 ------------------------------------------------------------ pt016365_POPTR_ MNFVGGERG-YFDKEE-----QEEEE----AM-S----------------SKLPFASPCT gm043561_Glyma1 MELMQEVKG-YSDSREE----EEEEE----GAAEEESSRKHHYYPFSSSPSNLYLSSSSA pt032938_POPTR_ MEFGTGF--------------SEGDQ--------------------MSRGKGLPFSSYSS gm017484_Glyma0 ------------------------------------------------------------ AT2G46870.1 ------------------------------------------------------------ gm053391_Glyma1 -----------------------IITI-------------------TREPESSR------ pt016366_POPTR_ ------------------------------------------------------------ pt038767_POPTR_ SSSSTKYTNF----------------LPEHHNMWPGSFDQSQQDSKTQEPS--------- Os009289_Os02t0 EAA--------------------------------------------PAPTSSSSSPAHH Os010946_Os03t0 ------------------------------------------------RPASAAA----- pt024887_POPTR_ S-S---------------------------------------------SPSSSSSHQKTQ Sb022430_Sorbi1 -------------------------------------------------PTAARS----- pt016367_POPTR_ ------------------------------------------------------------ gm008337_Glyma0 ------------------------------------------------------------ pt016365_POPTR_ SSSSSKYKNF----------------LPEHQNLWPRLFDQPRQDSETQEPS--------- gm043561_Glyma1 PSISSNYTSTTTSAVARPLHHHHVINIPYQQNPWLG-MNIVHHDHLIQSPESHNSSSGLG pt032938_POPTR_ SNS---------------------------------------------SPSSSSSQQRNQ gm017484_Glyma0 ------------------------------------------------------------ AT2G46870.1 ---------------------------------------------------MMTDLSLTR gm053391_Glyma1 -L---------HQ-------------QDAA-SNF-------------GKKLDLMDLSLGS pt016366_POPTR_ -----------------------------------------------------MELSLGN pt038767_POPTR_ -------------------------------LNF-------------DKKLELMELSLGN Os009289_Os02t0 AA--------------------------------------SASASASASGSSTPFRS--- Os010946_Os03t0 ------------------------------------------------------------ pt024887_POPTR_ LVVPLGQIFENHQMGSWLGNKYDQEDQDT--SRF------DESGASTAAKLDLMDVN--- Sb022430_Sorbi1 ------------------------------------------------------------ pt016367_POPTR_ -----------------------------------------------------MELSLGN gm008337_Glyma0 -----------------------------------------------------MDLSLGS pt016365_POPTR_ -------------------------------LNF-------------VKKLEFMELSLGN gm043561_Glyma1 LL---------HQ------------HQDAAGSNFIINNNQHHQHHHTTKQLDFMDLSLGS pt032938_POPTR_ LV--LGQIYENHQIGSWLGNKYDQVDQDT--SRF------NESVAVNAAKLDLMDVN--- gm017484_Glyma0 -----------------------------------------------------MDLSLGS AT2G46870.1 DEDEEEAKPLAEEE---GAREVA----------------------------------DRE gm053391_Glyma1 SK-EEEEGKLQQGG---GGGGVV----HHA-----------------------HEIVEKE pt016366_POPTR_ NN-ESESSSTDAGG---GASESI----------------------------------ERE pt038767_POPTR_ NN-ETERTSADAVV---GARESI----------------------------------ERE Os009289_Os02t0 ---DDGAGASGSGGGGGGGGEA--------------------------------EVVEKE Os010946_Os03t0 -----------------GGGEV-----QES-------------------GGRSLAAVEKE pt024887_POPTR_ ---DDEEG---------GRGES-----------------------------SCV-VIEKE Sb022430_Sorbi1 -----------------GGGEERAAEHQQQ-------------------QQQQLAAVEKE pt016367_POPTR_ NN-ESESSSTDAGG---GASESI----------------------------------ERE gm008337_Glyma0 SKEEEEEGNLQQ-----GGGGVV----HHA-----------------------HQVVEKE pt016365_POPTR_ NN-ESESSSTDAGG---GASESI----------------------------------ERE gm043561_Glyma1 SK---DEGNLP------GSSSSVYA-HHHAASGSSSVNGNNN-------LQQQQQPAEKE pt032938_POPTR_ ---DEEEG---------GRGES-----------------------------SSVQVIEKE gm017484_Glyma0 SK---DEGNLQ------GSSSSVYAHHHHAASASSSANGNNNNSSSSNLQQQQQQPAEKE * ::* AT2G46870.1 HMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYWN gm053391_Glyma1 NMFEKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKVWRFRYSYWN pt016366_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWN pt038767_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLILNFEDRNGKPWRFRYSYWN Os009289_Os02t0 HMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDAAANEKGLLLNFEDRAGKPWRFRYSYWN Os010946_Os03t0 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAASNEKGLLLSFEDRTGKPWRFRYSYWN pt024887_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKAWTFRYSYWN Sb022430_Sorbi1 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTGKPWRFRYSYWN pt016367_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWN gm008337_Glyma0 HMFEKVATPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKVWRFRYSYWN pt016365_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWN gm043561_Glyma1 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRNGKLWRFRYSYWN pt032938_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAEKYLPLDSSSNEKGLLLNFEDMNGKAWRFRYSYWG gm017484_Glyma0 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRNGKLWRFRYSYWN :**:**.****************:**:::***:::*****:*.*** ** * ******. AT2G46870.1 SSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGD-SGRDSRLFIDWRRRPK--------- gm053391_Glyma1 SSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGD-LYR-HRLYIDWRKRSA--------- pt016366_POPTR_ SSQSYVMTKGWSRFVKEKRLYAGDIVSFQRGVGE-TGK-HRLFIDWRRRPN--------- pt038767_POPTR_ SSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGE-SGK-HRLFIDWRRRPN--------- Os009289_Os02t0 SSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDEAAR-HRLFIDWKRRAD----TRDPL Os010946_Os03t0 SSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGE-AAR-GRLFIDWRRRPDVVAALQPPT pt024887_POPTR_ SSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGE-LGK-DRLYIDWRRRPD---APDHAS Sb022430_Sorbi1 SSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGD-AAR-GRLFIDWRRRPD------PPV pt016367_POPTR_ SSQSYVMTKGWSRFVKEKRLYAGDIVSFQRGVGE-TGK-HRLFIDWRRRPN--------- gm008337_Glyma0 SSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGD-LYR-HRLYIDWKRRPD--------- pt016365_POPTR_ SSQSYVMTKGWSRFVKEKRLYAGDIVSFQRGVGE-TGK-HRLFIDWRRRPN--------- gm043561_Glyma1 SSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGE-SYR-HRLYIDWKRRRD--------- pt032938_POPTR_ SSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGE-LGK-DRLYINWRRRPD---APDDPS gm017484_Glyma0 SSQSYVMTKGWSRFVKEKKLDAGDMVSFQRGVGE-------------LRPD--------- ****************:*:* *** *** * :*: * AT2G46870.1 ----------VPDH-------------PHFAAGAMF-----P------R---FYSFPSTN gm053391_Glyma1 HPHA---HHHAPD--------------PLFLPSIRW-----------------YSLPPTM pt016366_POPTR_ ----------APD--PTSFSHLELQNQLHYPQSLRW-----G------R---LYSMPQSN pt038767_POPTR_ ----------APD--PTTFSHLELQNQQHYPQSVRW-----G------R---LYSIPQSN Os009289_Os02t0 RLPR---GLPLPMPLTSHYAPW-------------------GIGGGGGF----FVQPSPP Os010946_Os03t0 HRFA---HH---LPSSIPFAPW--AHHHGHGAAAAA------AAAAGAR----FLLPPSS pt024887_POPTR_ HHQL---YHHNLPFSSIPWSPL-------------------------------LMRPPTA Sb022430_Sorbi1 HHQY---HHRLPLPSVVPYAPWPHAHHHHYPAAAAAVGVGVGAGAGAARTTTVLHLPPSP pt016367_POPTR_ ----------APD--PTSFSHLELQNQLHYPQSLRW-----G------R---LYSMPQSN gm008337_Glyma0 HAHAHPPHHH--D--------------PLFLPSIRL-----------------YSLPPTM pt016365_POPTR_ ----------APD--PTSFSHLELQNQLHYPQSLRW-----G------R---LYSMPQSN gm043561_Glyma1 HHHH---HHHGP---------------PHHLMSIRW-----GA---TDR---LYSLPSPT pt032938_POPTR_ RHQH---HFHNHHFSAIPWSPL-------------------------------LMRPPTV gm017484_Glyma0 HHHH---HHHGPDHSTTLFTPFLIPNQPHHLMSIRW-----GA---TGR----FGINATT . AT2G46870.1 YSLYNHQQQRHHHS--------GG---GYNY--------HQIPREFGYG----------- gm053391_Glyma1 PPRYHHDHHFHHH---------------LNYNNLFTFQQHQY--QLGAATAAATAAHH-- pt016366_POPTR_ LPM-QQPQLQH-----------------LNY-SIHPYQQHQH-H--NH------QYHYHQ pt038767_POPTR_ LSM-QQPQLRH-----------------LNY-SIHPYQQQQY-QNRNH------QNHYHQ Os009289_Os02t0 ATL-YEHRLRQ----------------GLDF------------RAFN------------- Os010946_Os03t0 TPI-YDHHRRHA--------------HAVGY------------DAY-------------- pt024887_POPTR_ PIL-PRDHLHLSNPNRNAYYNVGGSYYGHGY------------GNYNNV----------- Sb022430_Sorbi1 SSL-YDPHLRH-----------------VGY------------DAY-------------- pt016367_POPTR_ LPM-QQPQLQH-----------------LNY-SIHPYQQHQH-H--NH------QYHYHQ gm008337_Glyma0 PPRYHHDHHFHHH---------------LNYNNLFTFQQHQY-QQLG----AATTTHHNN pt016365_POPTR_ LPM-QQPQLQH-----------------LNY-SIHPYQQHQH-H--NH------QYHYHQ gm043561_Glyma1 PPR-HHDHLQH---------------------------------QQPL------------ pt032938_POPTR_ PVL-PRDHLHLSNPNRNTCYKVGGSSYGYGY------------GNYSNV----------- gm017484_Glyma0 ----HHYNNYH---------------------------------EMSS------------ . AT2G46870.1 -----------YFVRSVDQRNNPAAA------------------------------VA-- gm053391_Glyma1 -GDQNSGSGSLYYLRSSM--SMGGGD---------------------QNLQGRGN-NI-- pt016366_POPTR_ PSNISYGNAAQYYLRPPAS-TLPIGA---------------------VHEQ-GG--SH-- pt038767_POPTR_ PSTISYGTSAQYYLRPP-E-TLQIGA---------------------MHQQAGG--SH-- Os009289_Os02t0 -PAAAMGRQVLLFGSARIPPQAPLLA------RAPSPLHHH-----YTLQPSGDGVRAAG Os010946_Os03t0 --AAATSRQVLFY----------------------RPLPPQ-----QQHHPA-------- pt024887_POPTR_ -VNPCSSSESVFYMRSS--AGAAV-----------EPTPQQVGMGMVQWQLGGGGVV--- Sb022430_Sorbi1 --GAGT-RQLLFY----------------------RPL-HH-----QQPSTA-------- pt016367_POPTR_ PSNISYGNAAQYYLRPPAS-TLPIGA---------------------VHEQ-GG--SH-- gm008337_Glyma0 YGYQNSGSGSLYYLRSSM--SMGGGD---------------------QNLQGRGS-NI-- pt016365_POPTR_ PSNISYGNAAQYYLRPPAS-TLPIGA---------------------VHEQ-GG--SH-- gm043561_Glyma1 -NYNNNTM-------STPP-SMPLADHQTLNTRQQQQQQQQ-----QQQQEGGGNVSL-- pt032938_POPTR_ -VNPCSSSGSVFYMTSSAGAGAAL-----------EPAPQQVGMGMVQWQLGGGGVV--- gm017484_Glyma0 -TTTSGSAGSVFYHRSTPPISMPLADHQTLNTR---QQQQQ-----QQQQEGAGNVSL-- AT2G46870.1 DPLVIESVPV-MMHGRANQELVG-----------------TAGKRLRLFGVDME------ gm053391_Glyma1 VPMIIDSVPVSVGHH-NNRHGNGGITSGGATSS---------GKRLRLFGVNME------ pt016366_POPTR_ VPVVIDSVPV--VHG------------------------KTVGKRLRLFGVNME------ pt038767_POPTR_ VPLVIDSVPV--VHG------------------------KTAGKRLRLFGVNMD------ Os009289_Os02t0 SPVVLDSVPV--------------------IESP-----TTAAKRVRLFGVNLDNPHAGG Os010946_Os03t0 --VVLESVPVRM-------------TAG-HAEPP-----SAPSKRVRLFGVNLD------ pt024887_POPTR_ EPVVYESVPV---------------VQG-----------KAAAKKLRLFDI--------- Sb022430_Sorbi1 --VVLDSVPVRLP-----------TTPGQHAEPPAPVVASSASKRVRLFGVNLD------ pt016367_POPTR_ VPVVIDSVPV--VHG------------------------KTVGKRLRLFGVNME------ gm008337_Glyma0 VPMIIDSVPVNVAHHNNNRHGNGGITSGGTNCS---------GKRLRLFGVNME------ pt016365_POPTR_ VPVVIDSVPV--VHG------------------------KTVGKRLRLFGVNME------ gm043561_Glyma1 PPMIIDSVP--------------------------------------------H------ pt032938_POPTR_ EPVVYESVPV---------------VQG-----------KAAAKRLRLFGVNMDCP---- gm017484_Glyma0 SPMIIDSVPV--AHHLHHQQHHGGKSSGPSSTSTSP---STAGKRLRLFGVNME------ :: :*** AT2G46870.1 ----CGESGMTNSTEEESSSSGGSLPRGGGG--------GASSSS--------------- gm053391_Glyma1 ----CASSA-----EDSKGLSSGS----AAH--------VTTAASS-------------- pt016366_POPTR_ ----CPTQNDPS--SSVTMIRHGTLDSLSPR--------LASSSLP-------------- pt038767_POPTR_ ----CPTQDDGQ--SSSITMTHGTMGSFSSH--------LASSSLP-------------- Os009289_Os02t0 GGGAAAGESS----NHGNALSLQT----PAW--------MRRDPT--------------L Os010946_Os03t0 ----CANSEQ----DHAGVVG-KT----AP------------------------------ pt024887_POPTR_ ------------------------------------------------------------ Sb022430_Sorbi1 ----CAGSEE----ENGGGGGWRT----SA------------------------------ pt016367_POPTR_ ----CPTQNDPS--SSVTMIRHGTLDSLSPR--------LASSSLP-------------- gm008337_Glyma0 ----CASSA-----EDSKELSSGS----AAH--------VTTAASS-------------- pt016365_POPTR_ ----CPTQNDPS--SSVTMIRHGTLDSLSPR--------LASSSLP-------------- gm043561_Glyma1 ----CREKTKAIWGEHGMCF--------------------FNNIRR-------------- pt032938_POPTR_ ----ITDQSD----DYGHKLSSTT----AAATTLPHNATIALQPTPQLSSQSLQHPLHQL gm017484_Glyma0 ----CASSTS----EDPKCFSLLS----SSS--------MANSNSQ-------------- AT2G46870.1 --------------FFQ-LRLGSSS----------------------------------- gm053391_Glyma1 -----------SL--HQRLR----------------------LPLPHEDPLSS------- pt016366_POPTR_ -----------PP--FQ-VREPTG------------------AP---------------- pt038767_POPTR_ -----------PP--LQ-LRAPTS------------------AP---------------- Os009289_Os02t0 RLLE------LPPHHHHGAESSAAS-----------------SP---------------- Os010946_Os03t0 -----------PP---------LPS-----------------PP---------------- pt024887_POPTR_ ------------------------------------------------------------ Sb022430_Sorbi1 -----------PPTPH-----GLPS-----------------PP---------------- pt016367_POPTR_ -----------PP--FQ-VREPTG------------------AP---------------- gm008337_Glyma0 -----------SSLHHQRLRQQQQGLGITKGPVLGLRCCLIWIPLCN---LVSKLVGLAT pt016365_POPTR_ -----------PP--FQ-VREPTG------------------AP---------------- gm043561_Glyma1 -----------PP---QMLQLAV---------------------------LIF------- pt032938_POPTR_ RLYRGTPLAAMPPSTTQFLHKGKSS-----------------SP---------------- gm017484_Glyma0 -----------PP--LQLLREDT---------------------------LSS------- AT2G46870.1 -EDDHF-----------TKKGKS---------SLSFDLDQ------- gm053391_Glyma1 -SSARF----------GDHKGGSTGT------SLLFDLDPSLQYHRQ pt016366_POPTR_ -MQAEF-----------SKKGKA---------SLSFDLDL------- pt038767_POPTR_ -MQAEF-----------SKKGKN---------SLSFDLDL------- Os009289_Os02t0 -SSS------------SSSKRDA---------HSALDLDL------- Os010946_Os03t0 -SSS------------SSSSGKA---------RCSLNLDL------- pt024887_POPTR_ ----------------------------------------------- Sb022430_Sorbi1 -SSS------------SSSSGKA---------RCSLNLDL------- pt016367_POPTR_ -MQAEF-----------SKKGKA---------SLSFDLDL------- gm008337_Glyma0 LSFAAFLLTLSLNNWPSGYKGISSQTLFFFFSSSFFFLSVISTYK-- pt016365_POPTR_ -MQAEF-----------SKKGKA---------SLSFDLDL------- gm043561_Glyma1 -ING------------------------------------------- pt032938_POPTR_ -SSS------------SMS----------------LDLDI------- gm017484_Glyma0 -SSARF----------GDQRGVGEP-------SMLFDLDPSLQYRQ-
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